Capsicum annuum (peppers): 107878762
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Entry
107878762 CDS
T04646
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107878762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107878762
03036 Chromosome and associated proteins [BR:
cann03036
]
107878762
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107878762
Coactivators
SAGA/TFTC/STAGA complex
107878762
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107878762
STAGA complex
107878762
TFTC complex
107878762
SAGA complex
107878762
SLIK complex
107878762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
TAF4
Motif
Other DBs
NCBI-GeneID:
107878762
NCBI-ProteinID:
XP_016581362
LinkDB
All DBs
Position
7:224527828..224533934
Genome browser
AA seq
546 aa
AA seq
DB search
MSIVPEEAIEVISQSIGISNLSPDVLPALAADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDSALTLRNVEPIYGFASGDPLRFRRALGHKDLFYIEEKDVEFKDVIEAPLPKAPLDTTL
FAHWLAIEGVQPAIPENPPLEALVPLPDYRKAEYKEDGVPVDLKVPVKHVLSRELQLYYD
KITELTVNKSNSPLYKEALASLATDPGLHPLVPYFTYFVADEVARNLNNFDLLFALMRLV
WSLLQNSHLHIEPYLHQSMPSVMTCLVAKRLGNKFSDNHWELRDFTAKLVALICRRYGQV
YHSLQPRVTKTLRHAYLDTAKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLRLLEPEM
QLEKQKNEVKRHEAWRVYGALMCAAGLCLYEHFKMLPAFLSPSNRTFLKSKSKVSTTLSN
KRKTSMDNMISEPPTKKLETDGSTPMPSDSSPVGIEGATDMSATTLGVKDEDLSSTPQDL
QNKNVTNVTRTNRRENTGGQNQKAPAPLGQAWKKDMDAANSLPPLFEYFGESMLSFAPSP
ELSFFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtgccggaagaggctatagaagtaatttcacagagcatcggaattagcaat
ttatcaccggacgttttgccagctctcgccgccgatgtcgaataccgtattcgtgaaata
atgcaggaggctataaaatgtatgcgacattcaaagagaactactttatctactgacgat
gtggattctgcacttaccttaagaaatgtggagccaatatatggttttgcttcgggagat
cccttacggttcagaagagctcttgggcataaggatttgttctatattgaagagaaggat
gtagaattcaaagatgtgatcgaagcgcctctgccgaaagcaccactagatactactctt
tttgctcactggttagctatagaaggggtacagcctgctattcctgaaaatcctccactc
gaagcacttgttccgcttcctgattaccgaaaggcagagtataaggaggatggagttcct
gttgatctcaaagttcccgttaagcatgtcttatcccgtgagcttcagctttattatgac
aagattacagagcttaccgttaataaatctaactcccctctctataaagaagctctagca
agcttagcaacagaccctgggctccatcctttagttccttatttcacatattttgttgct
gatgaggttgcacggaatttgaataattttgatctcctttttgctttgatgaggctggtc
tggagccttcttcagaattctcatttacatattgaaccatacctgcaccagtcgatgccg
tctgtgatgacatgccttgtggcgaaaaggttggggaataaattctctgacaaccattgg
gaactaagggacttcacagcaaagttggttgctttaatatgcaggcgatatggtcaggtc
tatcacagtcttcagccacgtgtcacgaagactttgcggcatgcttatcttgatacagcc
aaggcactgcctcagcattatggagcaattcaagggctagcagctcttggacctggtgtg
gttcgcttgcttgtgcttccaaatcttgaagcttatttgcgattattggagcctgaaatg
cagcttgagaaacaaaaaaatgaagtgaagagacatgaagcttggcgtgtttacggggcc
ttaatgtgcgctgccggtctatgcttgtatgagcattttaagatgcttcctgcatttcta
tctccatcaaatcgaacattcctgaagagtaaatcgaaagtctcaactacattgtcgaac
aaacgcaaaacaagcatggacaacatgatctcagagccaccaaccaagaaattagagaca
gatggttccacaccaatgccatcagattcttcgccagtaggcatagaaggagctactgat
atgtctgccacaacgctgggtgttaaggatgaggatttatcgtcgacgccacaagatttg
caaaataagaacgtgaccaatgtgacgagaaccaaccgaagggagaatactggtgggcaa
aaccaaaaagcaccagctcctcttggtcaggcctggaagaaagatatggatgctgcgaat
tcgctgccacctctatttgaatattttggtgaaagtatgttgtcctttgcaccttctcca
gagttgtcattctttttgtga
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