KEGG   Capsicum annuum (peppers): 107878865
Entry
107878865         CDS       T04646                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1
  KO
K11797  PH-interacting protein
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cann04121]
    107878865
Ubiquitin system [BR:cann04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107878865
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Bromodomain Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SPT8 WD_LRWD1 VPS8_N Auxin_resp Agenet DUF4777
Other DBs
NCBI-GeneID: 107878865
NCBI-ProteinID: XP_016581514
LinkDB
Position
Unknown
AA seq 1695 aa
MSFRKYIPPCDAPSGSMKSLSLPGKANQNSQPSDPQRSTEADVDIDMGEVYFLIMHFLSA
GPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGAPSGDENDDGRSFPLSYNRLVERYSHVG
KDHLVRLLKQLLLSVKAPPLGMVGGNTINAAAVPTLLGTGSFSLLSSDQDQRNDEVKPQG
HLRWPHMLADQLRGLSLREIGGGFSKHHRAPSIRAACYAIAKPSTMVQKMQNIKKVRGHR
NAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVNSNNTLVASA
SNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWDARYSQ
FNPRLYIPKPTETIAGKNTGPSSSTVLQSHQIFCCSFNNSGTFFVTGSSDTCARVWNACK
SNSDDSEQPNHEIEILSGHENDVNYVQFSGCAVASRFSSTDASKEDCVPKFKNSWFNHDN
IVTCSRDGSAIIWIPRSRRSHGKGGRWQKAYHLKVPPPPMPPQPPRGGPRQRILPTPRGV
NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESTYVLDVHPSNPRIAMSAGY
DGRTIVWDIWEGAPIRTYEIGRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQKDA
KYDQFFLGDYRPVVQDTNGNVLDQETQLAPYRRNMQDLLCDAGMIPYPEPYQSMYQRRRL
GALGIEWRPSSFRFSIGTDFNMDQQYQTFPIIDLEMLIEPLPGFVDAMDWEPEIEIQTDE
SDSEYHVTEECSSGKEQGSFCSDASTYQEISDEDSEAEDDQKDALRRSRRTKQKEVEVMT
SSGRRVKRKNLDECDSSSHRTNHSRKSRHGRKAKKKSSSKCLRPQRAAALNALHLFSRIT
GTSTEGEDEYGSEGDSSDSESTLQDSDNGNEDSDVSLNSERHMHSKGKEICFDHSDETNK
LQPFPNSNLNGGIRRRLVLKLPNRDSSKYGPPKNYEPGLAGSSLTPEAAAEVSQNYFGCE
DNNLSDANGDIREKSEIEQPTKVENHLDLCKDGNIKWGGVKSRSTKRSRMGELLPSGSET
GPSSFAERSIPKENVVNGHSILEKDDHRVPPCSGIQNETNGIIHVNENHRQDAIQEAENV
TLLDGTDGDHPFKQNATPVPMRLRIRSKILSGHLDNCDKIDMKTSLEDSGCTACDTVSEC
QDTEKVLSSEAPTEEDSKTPTLDDGEREKKLDPDNIGGTSGTELQVSQQVRSHVMFTAVY
RRSKFGRARSGKEGVSGNTEATTSNVGSHTLAEGSEAIIEGVRRTRSIRLRSTTCDVNPA
HSNGRFVQPHNGSDGAPMEKTAGNRDAESSFEEQLLSSTSAVGLRSTRTRRGSYYAREPS
PPDRRKSYQAARSSWLMLVAQEEGSRYIPQRGDEIVYLRQGHEEYITQNNLRDLGPWKTI
KGKIRAVEFCIVENLEFKTRPGSGESCAKMTLKFVDPASDVVGKSFQLTLPEVTGFPDFL
VERTRYDAAIERNWASRDKCQVWWKNEGEEDGSWWEGRILNVQAKSHEFPDSPWERYVVR
YKSDPSETHQHSPWELYDADTQWEQPHINDEAREKLMHAFTKLEQSGNKAQDYYGVEKLR
QVSHKSNFINRFPVPLSLETIRARLENNYYRSLEGIKHDIEVMLSNAESYCGRNAELATR
VKRLSEWFRRTLSSL
NT seq 5088 nt   +upstreamnt  +downstreamnt
atgtcttttcggaagtatattcccccttgtgatgcaccatctggaagtatgaaatcattg
agcttacctggaaaggcaaatcaaaattctcaaccatctgatccacaaagatcaacagag
gctgatgtggacattgacatgggtgaggtctattttttgattatgcatttcctgtcagct
ggaccatgtcacagaacttatggccaattctggaatgaacttctggagcatcaactttta
ccccgtagataccatgcttggtattcaaggagtggagcaccaagtggtgacgaaaatgat
gatgggaggtctttccctttaagttacaatagattggtagaaaggtactctcatgtggga
aaggatcacttggtgaggcttttaaaacaattattgctgagtgtgaaagctccccctctg
ggtatggttggtggcaatacaattaatgcagcagctgttccgactctgctgggaactggt
tccttttcattgctcagcagtgatcaagatcagaggaatgatgaagttaagcctcaaggt
cacttacgttggccacacatgctagcagatcagctgcgtggactaagtttgagagaaatt
ggtggtggattttctaagcaccatcgtgcaccatctattcgtgcagcatgttatgccatt
gcaaaaccatccactatggtgcagaagatgcaaaatattaaaaaagttcgaggacatcgg
aatgcagtttattgtgcaatatttgatcggtctgggagatatgttattactggctcagat
gaccgacttgtaaagatttggtcaatggaaactgcatattgcttggccagctgccgtggg
catgaaggtgatatcactgacctagctgtcaattccaacaacactttagtagcttctgct
tcaaatgattgcatcatcagagtttggcgcttgcctgatgggctgccgatttctgtgttg
cgtggtcatactggagctgttacggcaatagcgtttagcccaagacctagttctgtttat
cagctcttatcgtcatctgatgatggaacatgtcggatttgggatgctagatattcccag
tttaatccgcgcctatacataccaaaaccgactgaaaccattgctgggaagaacactggt
ccatcatcaagcacagttttgcaaagccaccagatcttttgttgttcattcaataacagt
ggaactttttttgtaactggaagctcagacacttgtgcaagagtctggaatgcttgtaaa
tctaattctgatgactcagagcagcctaatcatgagattgagattttatctggtcatgaa
aatgatgtaaactatgtgcaattcagtggctgtgctgttgcgtccagattttcctccact
gatgcatcaaaggaagactgtgtccctaagttcaaaaactcatggtttaatcatgacaac
atcgttacttgttcccgtgatggcagtgcaatcatttggatcccgagatcacgtagatcg
catggaaagggtggacgttggcagaaagcgtatcatttgaaggttccacctcctccaatg
ccacctcaacctcctcgaggcggtccacgtcaaagaattcttccaactccacgtggtgtt
aatatgattgtctggagcttggataatcgttttgtccttgctgctatcatggattgcaga
atatgtgtgtggaatgctgttgatggtagcttagtgcattctttgacgggtcatactgaa
tcaacgtatgtactggatgttcatccatccaatcccagaatagccatgagtgctggttat
gatgggagaacaattgtctgggatatatgggaaggtgcacctattcggacatatgagatt
gggcgattcaagctagttgatggaaagttttctccggatgggacgtcaataatactttca
gatgatgttggccaattgtacattttgaatacagggcaaggagaatcccagaaggatgcc
aagtatgaccagttttttcttggagattatcgccctgttgttcaagatacaaatggaaat
gtccttgaccaggaaacgcaacttgctccgtacaggaggaatatgcaagatctcctttgt
gatgcaggcatgattccgtatccagagccatatcagagcatgtatcaacgaaggcggtta
ggagctttaggaatagagtggagaccctcatcattccgattttctattgggacagatttc
aacatggaccagcagtatcaaacttttcccattatagacttggagatgctgattgaacca
cttccaggatttgtggatgctatggattgggaaccagaaattgagatacaaactgatgaa
tcagattcagagtatcatgtaactgaggagtgttcttctggaaaggagcaagggagtttc
tgttctgatgcttcaacatatcaagaaattagtgatgaagacagtgaggctgaagatgat
caaaaagatgcacttcgtagatcaagaaggacgaaacagaaagaagttgaggttatgacg
tcctctggaaggcgtgtaaaaaggaagaacttggacgagtgtgacagcagttctcatagg
accaatcactctaggaaatcaagacatggtcgaaaagcgaagaagaagtcttcatcaaaa
tgtttgagaccccagagagctgctgctctcaatgcccttcatttgttttccagaattacg
gggacatctactgaaggagaagacgaatatggttcagaaggtgattcatcagatagtgag
tccacacttcaggactcagacaatggaaatgaagattcggatgtgtccttaaacagtgaa
cgacatatgcattcaaaggggaaagagatatgttttgatcactctgatgaaacaaataag
cttcagccatttcctaactctaatctcaatggcggaattaggaggagattggtcctaaaa
ctgccaaatcgtgattcaagtaaatatgggcctccaaagaattatgaacctggtctagct
ggttcatctttaactcctgaggcagctgctgaagtaagtcaaaactactttggctgcgag
gataacaacctgagtgatgctaatggtgacataagagaaaagagtgaaattgaacaaccc
acaaaagttgaaaatcacttggacctgtgcaaagatgggaacatcaaatggggaggggtc
aaatcccgctcaaccaagcgctctaggatgggagaactgttgccatcaggctctgagact
ggacctagctcatttgctgagagaagcattccgaaagaaaatgttgttaatgggcactca
atacttgaaaaggacgaccacagagttccgccttgttcagggatccaaaatgaaaccaat
ggaatcattcatgtcaatgagaatcatcgtcaggatgctatacaggaggcagaaaatgtt
actctcttagatgggactgacggtgatcatccatttaaacaaaatgctactcctgtccca
atgaggttacgcataaggtcaaagattctttctggtcatcttgataactgcgacaaaatt
gatatgaagacttcattggaggattctgggtgcactgcttgtgatacagtttctgaatgt
caggacactgagaaggtcttaagttcagaagctcccactgaagaagacagcaaaacacca
actttagatgatggagagcgtgagaagaagttagatccagacaatattggtggaacttct
gggacagaattgcaagtctcacagcaggtgcggtcgcatgttatgttcactgctgtttat
agaaggtcaaaatttggtcgggctagaagtggtaaagaaggggtcagtgggaatacggaa
gcaacgacttcaaatgtggggagccatactcttgctgagggatctgaggccattatcgag
ggagttcgaagaactagatctattagattaaggtcaacaacttgtgatgtgaatcctgca
catagcaatggcagattcgtgcagccacacaacggctcagatggagcgccaatggaaaag
actgcaggtaacagagatgctgaaagctcattcgaagagcagctacttagttcaactagt
gctgttggattgcgatctacgcgaacacggagaggcagctattatgcccgtgagcctagt
cctccagacagaaggaaatcataccaggcagcaagaagctcatggttgatgttggtagcc
caagaggagggctcccggtatatacctcagcgaggggatgaaattgtatatctaagacag
ggtcatgaggaatacataactcagaataacttgagggatttaggcccctggaaaacaata
aagggaaaaataagagcagtagaattttgtatagttgagaaccttgagttcaaaacacga
ccaggttctggagaaagctgcgctaaaatgacgctgaaatttgtagatcctgcttctgat
gtggtgggcaaatcttttcagttgacattgcctgaagtgactggtttccctgattttctt
gttgaaagaaccagatatgatgctgctatagaaaggaactgggcttctcgggataaatgc
caagtttggtggaaaaacgaaggtgaggaagatgggagttggtgggaaggtagaattcta
aatgtgcaagctaaatctcatgaatttcctgatagcccctgggaaaggtatgttgtccga
tacaagagtgatccatcggaaactcatcagcatagtccttgggaactatatgatgctgac
acccaatgggaacaaccccatataaatgatgaagctagagagaagctgatgcatgcgttt
actaagctggagcaatctgggaataaagctcaggactattatggggttgaaaaattgaga
caggtttcacacaagtcaaacttcatcaacaggtttcctgttcccttgtcacttgaaact
attcgggctaggctagagaacaattactataggagtctggaaggaataaagcatgacatt
gaggtgatgctctcaaatgccgagtcatattgtggaagaaatgcggagttagcaacgaga
gtgaagcgtttgtccgagtggttcagacggacactctcatctttgtag

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