Capsicum annuum (peppers): 107879277
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Entry
107879277 CDS
T04646
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107879277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107879277
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
107879277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
107879277
NCBI-ProteinID:
XP_047251506
LinkDB
All DBs
Position
8:complement(149549409..149565234)
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AA seq
1449 aa
AA seq
DB search
IASQSEAANEESVPQKIASQPELESEASNLRQSQIVSATEKMISVLADAGCTLINPLGPP
CLPSDLHKLRNKLQSVLSSDSSRKSEFLQGLSSYVNSHSNLRRILSPSRRVGLGSLRSDS
LARVLLLVPSVQSDIQNLLLEKLPEYFDVDPAGSIGGRXSSLCIEEDIARLILNQFRWLD
FLVDSEAFTEKLLQVLSISPVHLKKEIIGSLPEIIGEKNNKTVVDSLQDMLQEDSSIIVP
MLDCFSNLHLDDMLQDQVITVALSCIRTIDAEHIPYLLRFLLLLDTPTNIRRIISHIRHQ
LKLVGASNVWTTQQSKMKGKSVVNNEEASILDALRTSLRFNKVVICQETLNELKSLEKVQ
DHKVIDIWLLTLVYMNSEPLQKIVEKLLKKKILEGCIVETMFDQCVSGNTDLARDYLPTL
LSISEYLLACKEDKAREFGIHMYTNLFKELVDSYSRQEVLGALITHVGSGISHEVSSAMD
VMVLLALKYSQELVPLSSHITGILDYLEAFSVENLHKVYETFSLLAFSAEVTAGPFGSPI
SNELLVIVRKQLSHPDLVYKKMGLIGTLKIVSYLGDAKTTKLLPSSMSNYEEALELLETS
MNSCKQLPLPLIMFYDELAFTLKKKALHPAIVEWTSKHVGDFETKFLCDLDGGVLMVKEL
CCGLEGDLWMNLDGDISPICLNILPLVSSSLRAASSLQILPANFVLLSSIEGLANQGSLA
GIDALLGCPIHLPSSKFFCEMLWGSLSGKQKQIIILSLYYAANWRGNWXVLNAYCTQAVD
EFNAASQATREEITLKLFKRLRNLVFLESLLNSSLKQCSLSLPALQPLLESLSLNQLDHN
RNQEMKNENGNGNIGPSQKKKKEKKSSQISLTDGKFRQPTIMDALRKAGAIPSQEPSMGP
SGMCSKGSASEPSRNQQCNINMSANVDVSTAVDHVEAQRHKFRPLLLDCFTILTFQKTQH
SCCADPAAELPLCLYIPRDLNRKLDYFNPRRHILVRHMSVPLAFGEMKVIEFISKIQPLF
PSLRRHLDSAVSGLREDTDTCPDHWRTHSAFAGNPDIPNITSFRPSASRSIIKEILQCFG
KASNIPDVQRDRSVLSDLLEAFQPISISDCFFKGMQLIPSPGDMAYLYAGAYSFVGNIFD
AACAVSFALASKVLLSLESMLVSFQTILAIFFSVQEAGNFCLQTFDAKELCVKDIEDGQK
VKAEFIQKLLRIYLENSQSTSDSLSELACSVLPQVLSRRSAVEDGCCFPTLCPATFCIWY
RGQRFYVCLRRCLLKMILMLQHEENLAMINRLVKEILLLEKARGGGEVEEVKCLLKKLQQ
SVNVAVSLVNLCKTHDKVNVRAIAVKFGGKFVDSFLKAFGFLQGQFELHHEQIIKMVREL
QTATRTIQTLCSDAKGMKQTTITCKIPIAKRSMERLLFRVKELLHSTSTGYTFWMGILTL
HLPYMTIIR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atagcttcccaatcggaagctgcaaatgaggaaagtgttccgcaaaaaatagcttcccaa
ccggaattggaatcagaagcgtcaaatttaaggcagtcgcaaattgtaagtgcgactgag
aaaatgatttcggttctagcagatgccggttgtacactgattaatcccttgggtccgcct
tgtttaccgtctgacctacataagcttcggaacaagctccagagtgttttatcatctgat
tcatctcgaaagtctgagttcctccaaggtctctcgagttacgttaattctcacagcaac
cttcgccgtattttatcaccttcaagacgtgttgggcttggatcgctacgaagtgacagc
ctggcaagagtactgcttctggttccttcagtccaatcagacattcaaaacttgctgctt
gaaaagcttcctgagtattttgatgtggaccccgctggaagtatcggagggagataatcc
tctttatgtattgaagaagacatagcaaggctgattctgaaccaattccggtggcttgac
ttccttgtggattcagaagcatttacagaaaaactgttacaagtgttatctatttccccc
gttcatttgaagaaggagataattgggtccttgcccgagattattggggagaaaaacaac
aaaactgtcgtagattcgcttcaggacatgcttcaagaggattcttccattatcgttccc
atgcttgattgtttctctaacctccatttggatgatatgttgcaagaccaggtcattaca
gtggctttgtcttgtatccgaactattgatgcggagcatattccctacctattgagattc
ttactgcttttggatacgccaaccaatattcgtaggattatttcacacatccgacatcaa
ctcaaacttgttggagcatcgaatgtttggaccacacaacagagtaagatgaagggaaag
tcagtcgtcaacaatgaagaagcttcaatacttgatgccttgcgaacaagtcttcgattt
aataaagtggtaatttgccaagaaacattgaatgaactgaaaagccttgagaaagttcag
gatcataaggtgattgacatatggttgctcacgcttgtatacatgaacagcgagccttta
caaaagattgttgagaaattactgaagaagaaaattcttgagggatgtattgtggaaact
atgtttgatcaatgtgtttctgggaatacagatttggctcgggattatcttcctacactc
ctttccatttctgagtacttactggcttgcaaagaagataaagcccgggaattcggcatt
cacatgtacacaaatctgttcaaagagcttgtggatagttactcaagacaggaagtcctt
ggagcattaattactcacgtgggctctgggataagtcatgaagtgagttctgctatggat
gtgatggtcctccttgctttgaagtactcacaggagttggttccactttcttctcatata
actggcatcctagattacttggaggcatttagtgttgaaaacctgcataaggtatatgaa
accttcagtcttctggcattttctgctgaagtgactgcagggccctttggatctcctatt
tcaaatgaactactagtgattgtgagaaagcagctgagtcatcctgatcttgtttataag
aagatgggcttaattggcactcttaagatagtctcctacctcggggatgcaaagactacg
aagcttcttccatcatctatgtcaaattacgaggaagctttggagctcttggaaacatct
atgaactcttgcaaacagctgccacttccgttaattatgttttatgatgaactggctttt
acattgaagaaaaaagcacttcatccggccatagtcgaatggacaagcaaacatgttggg
gactttgaaacaaagtttttgtgtgacctcgatggtggggtgcttatggtcaaagagtta
tgttgtgggttggaaggagatttatggatgaacctcgacggagacatatctcctatatgt
ctcaacatcttgccacttgtatcctcttctttgcgggctgcttcatcactgcaaattctt
cctgcaaacttcgttttgctatcttcaattgaggggttggcaaatcaaggatctcttgct
ggaattgatgctcttcttggctgccctatacaccttccttcctctaagttcttctgtgaa
atgctttggggctctttaagtggaaagcaaaagcaaatcattattctatcattgtactat
gctgccaattggcgcgggaactggtaggtactcaatgcctattgtactcaagctgtcgat
gagtttaatgcagccagtcaagcaacaagagaggagataactcttaaactatttaagcgg
ttgaggaatcttgtatttttggagagcttgctaaacagttccctcaaacagtgctctctt
tccttacctgcactccaacctcttctggagtccttgtcgctgaaccaacttgatcataat
agaaatcaggagatgaagaatgagaatggtaatggtaatattggtccatcacaaaagaag
aagaaagagaagaagagcagccaaatatcacttactgatggaaaatttaggcagccaacc
atcatggatgctttgaggaaagcaggtgcgattccaagccaggaaccaagtatgggtcct
tctggaatgtgttcaaaaggcagcgcatctgagccatcaaggaatcaacaatgcaatatt
aatatgtcagcgaatgtagatgtttctaccgctgtggatcatgtcgaagcacaaagacac
aagttcaggcctcttttgttggattgctttacaatcttaacttttcagaagactcagcat
tcctgttgtgcagatccagctgctgagttgcccctttgtctatatattccgagggatcta
aacagaaagctggactactttaatccacgaaggcatatattggttaggcacatgagtgtt
cctcttgcttttggtgagatgaaagtaatagagttcataagcaaaattcagccactattt
ccttcccttagaaggcatttggattctgcagtatctggtcttagagaagatacagacaca
tgcccagatcattggagaactcattctgcctttgctggaaatcctgatatacccaacatt
acaagctttagaccatcagcttctagatctatcataaaagagatacttcaatgcttcggc
aaggcatcaaacattccggatgttcagagagacaggtcagtactttctgatcttctggag
gcattccagccaatcagcatttcagactgctttttcaaaggcatgcagttgattccatca
ccaggagatatggcttatttgtatgctggtgcatattcatttgttgggaatatctttgat
gcagcctgtgctgtctcatttgctttagcttccaaagtattgttaagcttggaatcaatg
cttgtgtctttccagactatcctagctatcttcttttctgtccaagaagctgggaacttt
tgcttacaaacttttgatgcaaaagagttatgtgttaaggacattgaagatggtcagaaa
gtcaaagcggagttcattcaaaagcttttacgaatttacttggaaaatagccagtccact
tccgattccctaagtgaacttgcctgctctgttttgccccaggttttatcacgcagatct
gcagtggaggatggctgttgttttcctactctctgtcctgcaacattttgcatttggtac
aggggacagagattttatgtgtgcttaagaaggtgtttactgaagatgattttaatgctg
cagcatgaagagaaccttgccatgattaaccgcttggtaaaggaaattttacttctggag
aaagccaggggtggtggtgaagtggaagaagttaaatgccttctgaagaaactacaacaa
tctgttaatgtggctgtatctttagtcaatttgtgcaagacccatgataaggtcaatgta
cgtgcaatagctgtcaagtttggagggaagtttgttgactctttcctcaaagcttttggc
ttcttgcaggggcaatttgaattgcaccatgagcaaataattaagatggttagagagctt
cagacggcgacgagaactatccagacactatgttcagacgcaaagggcatgaaacaaaca
acaataacctgcaaaatccccattgccaagagatctatggagcgattgttatttcgtgtt
aaggaacttcttcactcaacgtcaactggatacactttttggatgggtattttaaccttg
catttaccttatatgaccataatcagatag
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integrated database retrieval system
