KEGG   Capsicum annuum (peppers): 107880056
Entry
107880056         CDS       T04646                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107880056
Spliceosome [BR:cann03041]
 Complex B
  Other components
   Complex B specific factors
    107880056
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_RIG_2nd Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 DUF7165 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st VPS8_N Mala_s_1-like Beta-prop_LRRK2 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F zf_topless
Other DBs
NCBI-GeneID: 107880056
NCBI-ProteinID: XP_016582467
LinkDB
Position
1:complement(135978620..135991332)
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQSFQTLQNECQVSLNTVDSLETFIADINGGRWDA
VLPQVAQLKLPRKILEDLYEQIVLEMIELREMDTARAILRQTNVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYNDSTKEKRRAQISQALSAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEEMYPTTLSHTIKFGKKSHPECSRFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTF
DGSRVITASSDGSVKVWDAKTTECLQTFKPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCVGEDRNLYCFSYQSNKLEHL
MKVHEKDVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttctacactcgaaatcgaagctcgagatgtcattaagattgtccttcaattctgc
aaggagaactctctgcatcaatctttccagacattgcaaaatgagtgccaggtttctctt
aataccgtggacagccttgaaacctttatagctgacattaatggtggaagatgggatgca
gtactacctcaagttgcacaacttaagctgcctagaaagatactggaggatttatatgag
cagattgtcttagaaatgattgaacttcgagagatggatactgcacgagctattttaagg
caaaccaacgtgatgggtgtcatgaaacaggagcaacctgaaagatatttgcggctcgag
catctacttgttcggacttactttgatccacatgaggcttataatgactcaaccaaggag
aaaaggcgtgcccaaatttcccaagcactttcggctgaggtttctgttgttccaccatca
cgcttaatggctctgattggtcaagccttgaaatggcagcagcatcagggtttacttcca
cctggaacacagtttgatctattcagaggaacagctgctatgaaacaagatgaagaggag
atgtatccgacaaccctcagtcacactattaagtttggtaagaagagtcatccagaatgt
tctaggttctcaccggatggacaatttcttgtctcatgctcagttgatggatttattgag
gtctgggatcacataagtggaaaactgaagaaggatcttcaatatcaggctgatgaaact
tttatgatgcatgatgatgctgtcctttgtgttgattttagcagagactcggagatgctt
gcgtctgggtcacaagatggaaaaataaaggtctggcgcataaggactggtcagtgtttg
cgtcgccttgaacgtgcacattctcagggtgtcaccagtcttgtcttttctcgagatgga
acacagatcttaagcacatcctttgacagcacagcaagaattcatggcctgaaatcaggt
aaattgttaaaagaattccggggacattcatcttatgtgaatgatgccatctttacattt
gatggatctcgagtcatcacggcatctagtgacggctcagtgaaggtctgggatgccaaa
actacggagtgtctgcaaacatttaaaccacctcctcctttaaggggtggtgatgcatct
gtgaattctgtccatcttttccctaaaaataccgatcacattatagtgtgcaataagaca
tcgtctatttatctgatgacacttcaaggacaggttgtcaaaagtttctcatctggtaaa
agagaaggtggagactttgtggctgcttgtctatcaccaaaaggagaatggatttactgt
gttggtgaagacagaaacttgtactgcttcagttatcagtcaaacaaactggaacatctg
atgaaggtacatgaaaaggatgtaattggtattactcaccatccccatataaaccttgtt
gccacctatggagaagactgtaccatgaagctatggaagccttga

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