Capsicum annuum (peppers): 124885421
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Entry
124885421 CDS
T04646
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124885421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
124885421
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
124885421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
124885421
NCBI-ProteinID:
XP_047260631
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MVTSSIVNTYPLSSYTFGTKEPNMEKDSSVVDRLARMKVNYMKEGVRSSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPALQPDWQIGECVATWW
RPNFETSMYPYCPPHITKPKECKKLYLVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIHQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacatcaagtatagttaatacatatccactatctagctatacatttggtacaaaa
gaacccaacatggaaaaggattcatccgtcgttgatcgccttgctcgtatgaaagtcaac
tacatgaaggagggtgtaaggtctagtgttgaaggaattctcttggtacaagaacataat
catcctcatattcttcttctgcaaattgggaacacattttgcaaacttccgggtggacgc
ctaaagcctggagaaaatgaaattgagggtttgaaaaggaaactctccagcaaacttgca
gctaattctcctgcccttcagcctgattggcagataggtgagtgcgtggccacctggtgg
aggccgaactttgaaacctcgatgtatccatactgtcctccacacataacaaaacctaag
gagtgtaagaagctctaccttgttcacttatctgaaaaagagtactttgcagtacccaaa
aatctgaaacttcttgctgtgccattgtttgaactttacgacaatgttcagagatatgga
cctgtaatatctacaattcctcagcagctttccagattccagttcaacatgatccatcaa
tag
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integrated database retrieval system
