Capsicum annuum (peppers): 124885458
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Entry
124885458 CDS
T04646
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124885458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
124885458
Spliceosome [BR:
cann03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124885458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124885458
NCBI-ProteinID:
XP_047261423
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVIDEENLDAEQMEEDGDLADIEALNYDDLDNVSKLQKSR
RYIDIMQKVEDALERESDVTDKGVVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDKY
RLKFPELESLVHHPVDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKRKNLAGFSTATSQFHIGYIEQTELFQSTPPSLRMRACRLVAAKST
LAARVDSINGDPSGKTGRSLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSDTGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcctggcagatctggacgaattgtccgataatgaagct
gatgttattgatgaagagaatctcgatgctgaacagatggaagaggatggagacttggca
gacatagaggcacttaattatgatgatctagataatgtttccaagctgcaaaaatcacgt
cgctacattgacataatgcagaaagtggaagatgcacttgagagggagtctgatgtcacg
gataaaggtgttgttctcgaagatgatccagagtatcagttgatagtagactgtaatgcc
ttgtcagttgacattgagaacgaaatcattataatccacaacttcatacgtgacaaatat
cgattgaaatttcctgagttagagtcacttgttcatcacccagttgattatgctcgggtt
gttaaaaaaattggaaatgaaatggatctgacgcttgttgacttggaaggactgctaccc
tcagctatcatcatggttgtgtctgttacggcatcaactaccagtggcaagccattgcca
gaagatgttctacagaagacagtggaagcatgtgatagagcccttgctcttgattcagca
aagaaaaaggttcttgattttgttgagagtcgaatgggatacattgctcccaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcatcg
ttggcaaaaatgcctgcttgtaatgtccagcttcttggtgctaaaaggaagaatttagct
gggttctccacagctacatcccaatttcatataggttatattgagcaaacagaattattt
cagagtacacctccttcgttaaggatgcgagcctgtagactggtggcagcaaaatctact
ttagctgctcgcgttgactcgatcaatggagacccgtctgggaaaaccggaagatctctt
agggaagagatccgtaaaaagatagagaagtggcaagagccacctcctgcaaagcagcca
aagcctcttccagttcctgattctgagcctaagaaaaagagaggtggccgtcggctgaga
aagatgaaagaaagatatgctatcacggacatgcggaagctagcaaacaggatgcagttt
ggaatacctgaagaaagttccttaggggatggactaggggagggctatggcatgcttggt
caggccggaagtggcaagttgcgtgtatcggttggtcagagcaagcttgctgccaaagta
gcaaagaaattcaaggagaagagttatggaagcagtggggctacatcaggcttgacttca
agtttggccttcacgcctgtgcaaggaatcgagctgtcaaatcctcaggcgcttgcaaat
cagcttggcagtggaactcagagcacctatttctcggatactggaacgttttctaagatc
aagagaacatga
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