Capsicum annuum (peppers): 124893236
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Entry
124893236 CDS
T04646
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124893236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
124893236
Spliceosome [BR:
cann03041
]
Common components
Common spliceosomal components
SR proteins
124893236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124893236
NCBI-ProteinID:
XP_047260258
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MEDERDAEDAIRGLDRIEFGRKGRRLRIEWSKEERSSRRPETARKSSSSVRPSKTLFVIN
FDPYNTRTRDLERHFDPYGKILNTRIRRNFAFIQFETQEDATRALDATNMSKLMDRVITV
EYAIKDDDDRKDGYGPGKTYDRSPRRGYDRSRSRSPYGRDRRSPDYGRGRDRPSPDYGCG
RDRLSPEYGRGRDGPSPDFGRGRDQLSPGYGRGPSRSPNHRERNSEYGRGNSPAVEKERK
PGHGNVCSPSLRRERTNPGNGLMSSSPLKSRSPGYGNKPSPSPQRERSEKYSPNAYNRGS
SPSPKLEPVGSPARDGRGSSERYRRFAPY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaagagatgcagaggatgctattcgtggacttgaccgaatagaatttggc
agaaagggtcgcagacttcgcattgagtggtcaaaggaagagcgtagcagtaggaggcca
gaaactgctaggaaatcttcatctagcgtcagaccttcgaagactttgtttgtcataaat
tttgatccatataatactaggacaagggatctggaaaggcactttgatccatatggaaaa
atactcaatacaaggatccggaggaattttgcatttattcaatttgagacacaggaggat
gccactagagccctggatgcaacgaatatgagtaagctgatggaccgagttatcacagtg
gagtatgcaatcaaagatgatgatgataggaaagatggatatggtcctggtaaaacctat
gatcgatcacctaggagaggttatgaccgaagccgatctcgtagtccttatggaagagac
aggcggagtccagactatggtcgtggtcgagatcgtccaagtccagactatggttgtggc
cgagatcggctaagtcctgaatatggccgtggtcgagatgggccaagtcctgactttggt
cgtggtagagatcagctaagtcctggttatggtcgtggccctagtcgaagtcctaatcat
agggaaaggaattctgagtatggccgtggtaatagtccagctgtagaaaaggagagaaag
cctggtcatggcaatgtttgtagccctagccttcgcagggagagaacaaatccaggaaat
ggccttatgagcagcagccctttgaaaagcagaagtcctggttatggcaataaacccagt
cctagtcctcaaagggagagaagcgagaaatatagcccaaatgcttataatcgtggcagc
agcccaagtcctaaacttgaaccagtaggaagccctgcacgtgatgggaggggaagttca
gagcgatacaggaggtttgcaccttactag
DBGET
integrated database retrieval system
