Capsicum annuum (peppers): 124897966
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Entry
124897966 CDS
T04646
Name
(RefSeq) uncharacterized protein LOC124897966
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124897966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
124897966
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124897966
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124897966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
zf-CCHC
Retrotran_gag_2
HDOD
Motif
Other DBs
NCBI-GeneID:
124897966
NCBI-ProteinID:
XP_047267547
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Position
4:99866168..99877326
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AA seq
407 aa
AA seq
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MLSLRTLPIIMKTPRTIPSAPSTPPSPHSLPSRSTALRTLTSKKPRNILTNPTPTTQEQE
DLKWVALNLSRSELYLPLTFPTGQTFRWKQTGPIQYTGVVGRSHLVSLKQLDNGDIGYHF
HSTTASESKFAVARKALLDFLNVGISLTEVWESFKASDSRFVELANHLEGARVLRQEPLE
CLIQFICSSNNNIKRITMMVDFISSLGNFIKFHLGVLDLDAALYSEKPTAITEASSDEEK
SYYKHWDRSNRLGLIAKELLKLVEESSQTADESLAGTLMGTLTTIKFDSSCTMHVHVIKM
TNIAARLKSLGMEVEQNFLETRLENQGTHFINYVNHQGAEKKGKKHGKGQQKQLNVNQSS
SQVHKKGNKNEKCHFCEKSGHFQKDCLKRKAWFEKKGIPYNPNHKQE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctatcactgagaactctcccaataatcatgaagacaccaagaaccattccttcagcc
ccatcaaccccaccatccccacattctctcccttccaggtccacagctttgagaaccctc
acttccaagaaaccaagaaacattctaacaaatccgaccccaacaacacaagaacaagaa
gacctcaaatgggtagccctcaacttatcaagatcagaactttacttacccctcaccttc
ccaactggccaaaccttcaggtggaaacagacaggacccattcagtacacgggtgttgtt
ggtaggtcccacttagtctcactaaagcaacttgacaacggtgacattgggtaccatttc
cattccactactgcctctgagtctaagtttgctgttgctaggaaagctcttcttgatttt
ctcaatgtgggtatttctttaactgaagtttgggagagttttaaggcttctgattctaga
tttgttgaattggctaaccatttggagggtgctagagtactaaggcaagaacctcttgag
tgtcttattcagttcatttgctcatctaataataatatcaagaggattactatgatggtt
gattttatttcatcattggggaattttatcaaattccatcttggagttttagatcttgat
gctgcactttactctgaaaagccaactgctattactgaagctagcagtgatgaagaaaag
tcctattataagcactgggatcggtctaacagattaggcctaattgcgaaagaacttctg
aaacttgtggaagagtcttcccaaactgctgatgagtctcttgctgggacactaatgggt
actttgaccaccatcaagtttgatagttcatgtactatgcatgtacatgtcattaaaatg
acaaacatagcagcaagacttaagtcattgggaatggaagtggaacagaatttccttgaa
acgaggctagagaatcaaggaacccacttcattaattatgtaaatcatcaaggagctgaa
aagaaaggaaagaagcatggtaagggacaacagaaacaacttaatgttaatcagtcctca
tctcaagtacataagaaaggaaacaaaaatgaaaagtgtcatttctgtgaaaaatctgga
cactttcagaaagattgcctgaaacgtaaggcatggtttgagaagaaagggattccttac
aatccaaaccataaacaagaatga
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