Corynebacterium anserum: GP473_02710
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Entry
GP473_02710 CDS
T07289
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cans
Corynebacterium anserum
Pathway
cans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GP473_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cans03019
]
GP473_02710
03009 Ribosome biogenesis [BR:
cans03009
]
GP473_02710
Enzymes [BR:
cans01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GP473_02710
Messenger RNA biogenesis [BR:
cans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GP473_02710
Ribosome biogenesis [BR:
cans03009
]
Prokaryotic type
rRNA processing factors
GP473_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QNH95729
UniProt:
A0A7G7YMK9
LinkDB
All DBs
Position
660578..664084
Genome browser
AA seq
1168 aa
AA seq
DB search
MAISSQELSAQAAQIDRDQLGEKTRVHALAKMLGVSSAELLTILAEHSIEGKRPASTVTK
QQVGAVLDALASTQTTVNKSGKKTAKNTTKKTAKKTAKKAVAKKTEKTAETTKKTAKKTS
NQTAEPTAPVTEESSAQQADNVTVEGKPARQRAKKTVKRTTRKKTSGNTVEAVQSPEASA
EPDSPADKNAAEKTSADKSYKDAVEKTPADKNDKEAVEKTSADKSYKDAVEQASEDKDSG
QKALAVKSQTDDAEQHHSDVQEEPKEKTTRRRVRRVVRRYGASEQLAQEKSEEHAKETAP
GHIDSLSDQDATSQREDTPQSDTESDKEESRSNSARRSRRRRRSRGRRGTRTTGKQEQIE
APLAGEQDNEEDKKTYSDEEERKTHAEEIKPEKLHPAERDEADIVDEPVRVKGSTRLESR
RKWRQENRREPRHIVSRSEFLARRESVERKMVVRDSERTDKAGLTTQVGVVEDGMLVEHF
VASETQSSIVGNIYLGTVQNVLGSMEAAFIDIGTGRNAVLYAGEMNWHSPHLHTKTRRID
QALKAGDQIMVQVIKDPLGHKGARLTGRISFAGRYLVYFPGGTTAGISRKLPEGERKRLK
EILTRVVPGEGGAIIRTAAENVEEERIREDVERLHRIWESVAKEETHARSRKGAKPIALY
EEPNMLVKVVRDIFNEDFTELIVEGEQSWSTVRDYVGRMAPDLKDRVVKWHPQRNGGQDV
FAAMNLDEQLAKALSRKVWLPSGGHLVFDHTEAMTVIDVNTGSFIGSGGNLEETVTQNNL
EAAEEIVRQMRLRDLGGMIVVDFIDMVLEENQDLVLRRLTEFLGRDRTRHKVSEVTSLGL
VQMTRKRLGTGLLETFSTVCEHCGGRGVIIHADPVEDHGSDKDFERRDHGNRKVRQQLRR
EQRLREEAQARRASAEAVQTVHAASTPEDVPEEEAHAKPSETPQNVTQDERAVAHPRRRV
RRVVRRHNVPTIETSSGSRGTRSKKSSTSADRAAARRVESRRESDQQQVRHDDRDHGRTD
GIEKQGRRRMRRVVRSARRVVDQPSMTRPDENEVNGSAQDHVSVLTHENTRSFDEAQREF
DSSPRRKRNTRGNSRSDIPPRPEDFATGVAAEDSDGKKSSRRPMRTARRRSVRRSSGERT
ASTERKTQAQAQGGKRRVRRVVRRVNEN
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtggctatttccagccaggaactgtcggcacaggccgcacaaattgatagagaccaactg
ggggagaaaactcgagttcacgcactagccaagatgctcggcgtgagcagcgcagaactg
ctgactatcctcgccgaacacagcattgaggggaagcgtccagcatccaccgtgactaaa
cagcaagttggtgcagtgctcgatgccttggcatccacccagacaaccgtgaacaagagc
ggtaagaaaaccgcgaagaacaccacgaaaaagactgcgaagaaaaccgcgaagaaggcg
gttgcgaaaaagactgagaagaccgcggagacgacgaaaaagactgcgaagaaaacctct
aatcagaccgcagagccgacggctccggtgacagaagagagcagcgcacagcaggctgac
aacgtcactgtagagggaaaacctgcacgtcaacgcgcgaaaaaaactgttaagcggact
actcgtaagaagacttcgggtaacaccgtagaggctgtgcagtccccagaagcatcggct
gaacctgatagccctgcagataagaatgccgccgagaaaacctccgccgataagagctat
aaggacgcggttgagaaaacccctgcggataagaacgataaggaggcggtcgagaaaacc
tccgccgataagagctataaggacgcggtcgagcaggcatcagaggataaggattccggt
caaaaagcattagcggttaagtcccaaactgatgatgctgaacaacaccactctgatgta
caggaggagccgaaggaaaagacgactcggcgccgtgtgcggcgggtcgtgcgccgatat
ggtgccagcgaacagctggctcaagagaagtccgaggaacacgccaaggagacagcacca
gggcatatcgattctctctccgatcaggacgctacttctcaacgtgaggacacaccacag
tccgacacggaatctgacaaagaagagagccgttccaacagcgcgcggcgttcacgccgt
cgtcgtcgcagccgtgggcgccggggaacaagaaccaccggcaaacaggaacaaatcgag
gctcccctcgctggtgagcaggataacgaggaggataagaaaacatacagtgacgaagag
gaaaggaaaacacacgctgaggaaataaaaccagaaaagctacaccctgccgagcgggac
gaggccgatattgtcgacgagccggtgcgcgtgaagggcagcacccggctagaatcccgc
cgcaaatggcgccaggagaaccgtcgcgaaccacgccatatcgtgagccgtagtgagttc
ctcgctcgtcgcgagtctgtcgaacgcaagatggtggttcgtgactctgaacgcaccgac
aaggcaggtctcaccacacaggtcggtgtggtggaagacggaatgctggtggagcacttc
gttgcttccgagacccaaagctctatcgttggcaatatctacttgggtacggttcaaaac
gtgttgggcagcatggaagctgcattcattgatatcggtacaggtcggaatgcggtgctc
tacgcgggtgagatgaattggcattcgccacacctgcacaccaaaacgcgtcgcattgac
caggccttgaaagccggcgaccagatcatggttcaagtcatcaaggatccattgggacat
aaaggtgcgcgtctcacagggagaatcagtttcgctggccgctacctggtgtacttccca
ggtggaacaacggcgggcatctcacgcaaactccctgaaggtgagcggaagcgtctcaag
gaaattctcacccgagtagtccccggtgagggtggagcgatcattcgtaccgctgccgag
aatgtggaggaagagcgcattcgagaagatgttgagcgcctacatcgcatctgggaaagc
gtagcgaaggaagaaacacacgcgcgcagtcgcaaaggcgcaaagcccatcgccctctac
gaagagccgaatatgctggtcaaggtagtccgcgatatcttcaatgaagatttcaccgag
ctcatcgtagaaggtgagcagtcttggtcgaccgtgcgtgactatgtaggcagaatggcg
cctgatctgaaagaccgcgtggtgaagtggcatccgcagcgcaacggcggccaagacgtg
tttgctgcgatgaacttagacgagcagctggctaaggcgttaagccgtaaagtgtggttg
ccatctggtggtcatttggtatttgaccacactgaggccatgaccgttatcgatgtgaac
acggggtcatttatcggttccggtggcaatctcgaagagaccgtcacacaaaacaactta
gaggcggctgaagagattgttcgtcagatgcgccttcgagatctgggcggcatgatcgtg
gtggacttcatcgatatggttctggaagagaaccaagatttggttctacgacgtcttacc
gagttcttaggacgtgatcgcacccgtcacaaggtgtccgaagtgacgtcgttgggactg
gttcaaatgactcgtaaacgtttgggcacaggtcttctggagacgttttctacagtttgc
gagcactgcggcggtcgcggggtcattattcacgctgatccagttgaggatcatggcagc
gataaggactttgaacgtcgtgatcatggcaaccgcaaggtgcggcagcagttgcgtcga
gaacaacggctgcgggaggaagctcaggcgcgtcgtgcgtctgcggaggctgttcagaca
gtacacgcagcgtctaccccggaagatgtgccagaggaagaggctcacgcaaagccgagc
gagacgccgcagaatgtcacccaagatgagcgcgctgtggctcaccctcggcgccgtgta
cgccgtgtggttcgacgccacaacgtcccaaccatcgagacatccagtggatctcgtggc
acaaggtctaagaaatcgtccacttccgcagaccgtgctgccgcccgccgcgtggagtcc
aggcgtgagagtgatcaacaacaggttcgccatgacgatcgagatcacgggcgtacagat
ggcatagagaagcaaggacgccgccgtatgcgtcgtgtcgtgcgttcagcgcgtcgggtg
gtggatcagccatccatgacgcgccctgacgagaacgaagtcaacggctctgcccaggat
cacgtgagtgttcttacccacgagaacacgcggagtttcgacgaagctcaacgtgagttc
gattcctctccgcgccgaaagcgaaatacacgaggcaattcgcgatctgatattccgccg
cggccggaggacttcgccactggggtagcggcggaggactccgatggcaagaagtcttcg
cgccggccgatgcggacagctcgcaggcgcagtgtgaggcgttcttccggcgagcgcact
gcgtcgaccgaaagaaaaacgcaggcgcaggcacaaggagggaaacgccgcgtgaggcgc
gttgtccgtcgtgtcaacgagaactag
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