Kaistella antarctica: NCTC13489_00084
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Entry
NCTC13489_00084 CDS
T06886
Symbol
uvrA_1
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cant
Kaistella antarctica
Pathway
cant03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13489_00084 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_00084 (uvrA_1)
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13489_00084 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13489_00084 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_25
ATPase_2
AAA_15
Motif
Other DBs
NCBI-ProteinID:
VEH95123
UniProt:
A0A3S4UY69
LinkDB
All DBs
Position
1:92281..95112
Genome browser
AA seq
943 aa
AA seq
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MKDQKEYIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVS
DAYSLTTGQRLVSYTGEQILEAVKNNYKGEKVMLLAPVVSSRKGHYHELFVQMAKKGYGQ
ARIDDEIQSIEYDLKLDRYKMHDIDIVIDRWIIGESASEARMEQSLKTALNMGEGVIGIQ
RLESKNIEYFSKNLMDADTGYSLALPEPNTFSFNSPKGSCPYCKGLGTVKKVNTDYFVEN
PKLSINQGGLLPLEDIKSNKWILGQIKNILEIYGLTLATPMKDIPKEALDFIYNGCHKEI
NKDLKHAGINKKIKVNFDGLVASINEMIDDKESYEATLLERHFTTEETCPECHGTRLQPS
SLSFKIDGKNIAEINALSLLDLKEWLIQVEDKFNKNNKIIAHEILKEIKTRLQFLLDVGL
DYLSLSRSSRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLIASLKNLR
DIGNSVIVVEHDKDMIMEADEVLDIGPRAGKFGGEVLWQGKPQDLLKADTITADYLTGKR
KIEIPEVRREGNGKSLVLKGATGNNLKNVNLEVPLGKLVVVTGISGSGKSSLINGTLYPI
LNQHFYRAVKDPLPYKKLDGIDNIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFAEL
PESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLEMTIDEATEFFQPIPKIYARVKTMQDVGLGYITMGQQSTTLSGGEAQRI
KLATELSKRQTGNTLYILDEPTTGLHFEDVKVLMDAINKLIDLGNSFIIIEHNLDVIKLA
DHIIDIGPEGGFRGGEIIAKGTPEEVSRSKKSLTAKFLRRELN
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcagaaagaatatatagaagtttacggcgctcgtgaacataatttaaaaaat
atcgatgttaaaattccccgcaatgaactggttgtaatcaccggactttcaggcagtggg
aaatcgtctttggccttcgatactatctttgccgaaggtcagcgaagatatatcgaaact
ttttcggcgtatgccagacaatttttaggcggtttagaaagacctgatgttgataaaatc
gatggcctttctccagtgattgccatcgaacagaagacgaccaataaaaatccacggtcg
accgttggaaccgtgacggaattgtatgactttttacggctgctttttgcccgagtttca
gatgcttattctttaacgaccggacaaagattagttagttacaccggggagcagatttta
gaggccgtcaaaaataattacaaaggagaaaaagtaatgttgttggcgccagtcgtcagt
tcccgaaaaggtcactaccacgagctgtttgtgcaaatggccaagaaaggatatggtcag
gcgagaattgacgacgagattcaaagtattgaatacgatttaaaactcgatcgatataaa
atgcacgatattgatatcgttattgatcgttggattatcggtgaaagtgcttcggaagct
agaatggagcagtcactaaaaactgctttgaacatgggcgaaggagtgattggaattcaa
agattagaaagtaagaatattgaatatttttctaaaaatctaatggatgccgatacggga
tattcattggctttaccagaaccgaatacgttttcgtttaactctccgaaaggcagttgt
ccttattgcaaaggtttgggtactgtaaagaaagtaaacacggactatttcgttgaaaac
ccgaaactgtcgattaatcaaggtggtttacttccgttagaagatattaaatccaacaaa
tggattttgggtcaaattaaaaatattctagaaatctacggccttactttagccacgccg
atgaaagatattccaaaagaggcgctggattttatttacaatggctgtcataaagaaatc
aataaagatttaaagcatgccggaatcaataagaaaatcaaagttaattttgatggttta
gtggcgtcgattaacgaaatgatcgatgataaagaaagttacgaagcgactttgttagag
cggcatttcacgacggaagaaacttgtccggaatgtcatggaactcgtttgcaaccttct
agtttaagttttaaaatcgatggcaaaaacattgcggaaatcaatgcattgtctctactt
gatttgaaggaatggttgattcaggttgaagataaattcaataagaacaataaaatcatt
gcgcacgaaattctaaaagaaatcaaaaccagattgcagtttttgctcgatgttggttta
gattatttgagtttgagccgaagttcaagaacgctttctggtggcgaatctcaacggatt
cgtttggctacgcagatcggttcacaactcgtaaatgtactttatattttagatgaacct
tcgattggtctgcatcaaagagataacgaaagattgatcgcttctttgaaaaatttacgg
gacatcgggaattctgtaattgttgtggaacatgacaaagacatgattatggaagccgat
gaggttctagatatcggtccgcgcgctgggaaatttggtggagaagtcctttggcaaggg
aagcctcaagatttattgaaggctgataccatcaccgcagattatttgacggggaaacgg
aaaattgaaattccggaggttcgaagagaaggaaatgggaaatcattggttttaaaagga
gcgaccggaaataatcttaaaaatgtgaatttagaagtgccgcttggaaaactcgttgtc
gtaacgggaatttcaggaagtggaaaatcttctttgatcaatggaactttatatccgatt
ttaaatcagcatttttatagagcggtgaaagatccattgccgtacaaaaaattggatgga
attgataacatcgacaaaattgttgatgttgatcaaactccgatcggtagaactccacgt
tcaaatcctgcaacttacacaggaatgtttacggatattcggaatctttttgcagaactg
ccagagtctaaaatccgaggttataaagcaggacgattttcgttcaatgtaaaaggcgga
cgttgtgaaacttgccaaggtggaggtttaaaagtcattgaaatgaatttcttacccgat
gtttatgttcactgtgaaacctgtaatgggaaaagatttaaccgcgaaactttagaagtt
cgttacaaaggaaaatctatttctgatgtgttagaaatgaccattgatgaagccacagaa
ttcttccagccgattccaaagatttatgccagagtcaaaaccatgcaagatgttggttta
ggatatatcaccatgggtcagcaatcgacaacattgagtggaggagaagctcagcgaata
aaactggcgaccgaattgtctaaaagacaaaccggaaatactctgtatattctcgatgaa
ccaacaacaggattgcatttcgaagatgtaaaagtcttgatggacgctatcaataaattg
atcgatttaggaaattcattcattattattgaacacaatttagatgtcatcaaactggct
gatcatatcatcgacatcggaccagaaggtggattccgtggtggagaaattatcgcaaag
ggaacacctgaggaagtatcaagatcgaagaaatctttgacagcgaagtttttgagaaga
gaattaaattag
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