Kaistella antarctica: NCTC13489_00193
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Entry
NCTC13489_00193 CDS
T06886
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cant
Kaistella antarctica
Pathway
cant03030
DNA replication
cant03410
Base excision repair
cant03420
Nucleotide excision repair
cant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13489_00193 (polA)
03410 Base excision repair
NCTC13489_00193 (polA)
03420 Nucleotide excision repair
NCTC13489_00193 (polA)
03440 Homologous recombination
NCTC13489_00193 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cant03032
]
NCTC13489_00193 (polA)
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_00193 (polA)
Enzymes [BR:
cant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13489_00193 (polA)
DNA replication proteins [BR:
cant03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC13489_00193 (polA)
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC13489_00193 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13489_00193 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DUF2202
ACS_CODH_B_C
Motif
Other DBs
NCBI-ProteinID:
VEH95554
UniProt:
A0A3S4UYK2
LinkDB
All DBs
Position
1:212290..215121
Genome browser
AA seq
943 aa
AA seq
DB search
MSENNDKRLFLIDAYAMIFRGYYALIRSPRVTSTGIDTSAIFGFTNSLIELIRREKPTHL
AVVFDVGQASVRTADYADYKANRNETPEAIKLAIPYIHRILDAMHVPILGLEGYEADDLI
GTLSVKAEKEGYEVFMVTPDKDFAQLVTDRVKIYKPGLKGAEFEILGVEEVKAKYEIEDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAKKFLKEYGSIENLLANTADLKGKLKEKVENSA
ERGILSKKLATIICDAPIEFHQEQYDLDTPDFEKVKEVFDEIEFRRLYENLFRAFSSTNE
NGTSSSKPSLSNPQPVITANQSLQLDLFANFEELDQATTTKETVFDNDHLYQYIDSPKAQ
YMLVRNLMQQQAVSFDTETTSLNEMEAELIGLSFSYKNGLAYYIPLSENRDEVLETLEIF
RPFFEKKDILKIGHNIKFDYKILKLYGISVQGLLFDTMIAHYLLNPDGRHVMEYLSEMYL
NYKPISLESLVGKKGKNQSSLRSISLAEQTEYASEDADLAFRLYQVFAPQLKIENLEDLF
FKVEMPLMKVLAKMELEGIALDKKWLAQESIDLENDLRQLEKTIFELSGEKFNMNSPKQL
GEVLFEKMQLDPKAKKTKSGQYATGEDILQKLSSKHEIIQHILEYRTYQKLKSTYVDALP
LQIDKDDHRVHTNFSQTTAATGRLSSLNPNLQNIPIRTLRGQQIRGAFVANPGNKLIAAD
YSQIELRLIAAISEEENMIKAFQDGEDIHASTASKLFNIPLEEVTKTQRSQAKTVNFGIL
YGQGAFGLAEQTGLSRKEAKEMIESYFETYPKLKKYMANQVVKAQEMGYVETILNRKRHL
KDINSANFVVKAHAERNAVNAPIQGSAADVIKLAMIKIDEQLTEQNLKTKMLLQVHDELV
FEAPEEELETVTALIKKEMESAYETTVPLLVEVGVGDNWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaataacgataaacgtcttttcctcatcgatgcgtatgcgatgattttccgt
ggatattatgctttaataagaagtccgcgagtgaccagtacagggatcgatacctccgct
atatttggatttaccaactctttaattgaattaatccgtcgtgaaaaaccgacacacttg
gccgtcgttttcgatgtcggacaagccagcgttcgaactgccgattacgctgattataaa
gccaaccgaaatgaaacgcccgaagctataaaattggccattccgtatattcatcggatt
ttagacgcgatgcatgttcctattttaggcttagaaggttatgaagctgatgatttaatt
ggaaccttatctgtaaaagcggaaaaggaaggttacgaagttttcatggtaacgcccgat
aaagactttgcccaattggttacagacagagttaagatttataaaccaggcttaaaaggt
gcagaatttgagattctcggcgttgaagaagtaaaagcgaaatatgaaattgaagatccg
aaacaagtcattgattttcttgccatgatgggagatgcggtagataatattcccggcttg
gaaggtgttggagaaaaaacggcgaagaaatttttaaaagaatacggaagcattgaaaat
ctactggcgaatacagcagatttaaaaggaaaattaaaagagaaagttgaaaattcagct
gaacgtgggattctttccaagaagttagcgaccatcatttgtgatgctccgattgagttt
catcaggaacaatatgatctagatacgccagatttcgaaaaagtaaaagaagtttttgat
gaaattgagttccgtcggttatatgaaaatttattcagagcattttcttccacaaatgaa
aatggaacttccagcagtaagccttctctttcaaatccacaaccagtaattacggcgaat
cagtcgctgcagttggatttgtttgccaactttgaagaattagaccaggcgacgacgacg
aaggaaaccgtttttgataatgatcatttataccaatatatcgattctccaaaagcgcag
tatatgttggttcgaaatctgatgcaacaacaagccgtttctttcgataccgaaaccact
tctttaaatgagatggaagccgaattaatcggactaagtttttcttataaaaacggctta
gcttattatattcccttatccgaaaatcgcgacgaagtgttagaaacgctggagattttc
cggccgttttttgagaaaaaggatattttaaaaattggacataatataaagtttgattac
aaaattttaaaactctacggaatttcggttcaaggtttactctttgacaccatgattgcc
cattatttactcaatccagatggccgacatgtgatggaatatctatctgaaatgtatttg
aattacaagccgatttcactagaatctttagtaggtaaaaaagggaaaaaccaaagtagt
ttacgttcgatttctttagcggaacaaaccgaatatgcaagtgaagatgccgatttagct
tttcggctttatcaagtttttgcacctcaattgaaaatagaaaacttagaggatctcttt
tttaaagtcgaaatgcctttaatgaaagttcttgccaagatggaactggaaggaattgcc
ctcgacaaaaaatggttggcccaagaaagtatcgatttagaaaacgatttgcgtcagtta
gagaaaacaattttcgaattgtcaggtgaaaaatttaatatgaattctccgaaacagttg
ggtgaagttttatttgaaaaaatgcagctggatccgaaagccaagaaaacgaaatctggg
caatacgccacaggcgaggatattctgcaaaagctatcttccaaacacgaaattattcag
catatattggaataccgcacgtatcagaaattgaaatctacttacgttgatgccttgcca
ttacaaattgataaagacgatcatcgcgtacataccaatttctcgcaaactacagcagcg
accgggcgtttgtcaagtttaaatccgaatttacagaatattccaatccgaactttacgc
ggacagcaaattcgaggagcatttgttgcaaaccctggaaataaattgattgcggcagat
tattctcaaattgaattgcgcttaattgcggcaatttctgaagaggagaatatgattaaa
gcctttcaggatggggaagacattcacgcttccacagcttctaaattatttaatattcct
ttagaagaagtaaccaaaacgcaacgttcccaagcaaaaacagtcaactttggaattctg
tacggacaaggtgcctttggtttagcagaacaaaccggactgtccagaaaagaagccaag
gaaatgattgagtcttattttgaaacttatcccaagttgaagaaatacatggcaaatcaa
gtcgtaaaagcgcaggaaatgggttatgtcgaaaccatattaaatcgtaagagacattta
aaagatattaattcagccaactttgtagttaaagcgcatgcagaaagaaacgccgttaac
gctccaattcaaggaagtgctgccgacgtcattaaactggcaatgattaaaatcgatgag
caattgaccgaacaaaatttaaaaacgaaaatgctattgcaggttcatgatgaattggtg
tttgaagcaccagaagaagaattagaaactgtgaccgctttaattaaaaaagaaatggaa
tcggcgtatgaaactacggttcctttgttggtcgaggttggagtaggagataattggttg
gaagcgcattaa
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