Kaistella antarctica: NCTC13489_00643
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Entry
NCTC13489_00643 CDS
T06886
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cant
Kaistella antarctica
Pathway
cant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13489_00643 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_00643 (xthA)
Enzymes [BR:
cant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC13489_00643 (xthA)
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC13489_00643 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
VEH96921
UniProt:
A0A3S4YHD2
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All DBs
Position
1:702655..703431
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AA seq
258 aa
AA seq
DB search
MKIATYNVNGVNGRLPVLLKWLEEEKPEVVCLQELKAPQEKFPEQEILEAGYQAIWVGQK
SWNGVAILTKDLNTEVIRTALPGDESDEQSRYLEVKISDLTVVCIYVPNGNPTPGEKYDY
KLKWLERLDAQAELLISSGKPVIITGDFNIIPTESDVYKPEKYIKDALFLPEVRTAFQNL
IAQGWTDGLRHLYPAETIYTFYDYFRKAYERNAGMRIDHFLLSPELIPHLKTGGVDKEVR
GWEKSSDHVPTWIELENL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcaacctataacgtaaacggagtcaatggtcgactgccagttttattaaaa
tggctcgaggaggaaaaacctgaggtcgtttgtttacaggaactaaaagcgccacaagaa
aaatttccagaacaggaaattttagaagccggctatcaggctatttgggtcggacaaaaa
agttggaatggtgttgcgattttaacaaaagatctaaacaccgaagttattcgaactgcg
ctgccaggagatgaaagcgatgaacaaagtcgctatctagaagtaaagatcagcgatctc
acggtagtttgcatttacgtacctaatggaaatcctacacctggtgaaaaatatgattac
aaactgaaatggctggagagactcgatgcccaagctgaacttctcatcagttcgggaaaa
cccgtaatcatcaccggagattttaatattattcctacagaaagcgatgtttataaaccg
gagaaatacataaaagatgcactctttttacctgaagttagaactgccttccagaattta
atagctcaaggttggactgatggattgcgacacttgtatcccgcagaaacaatttacacc
ttctacgattatttcagaaaagcctacgaaaggaacgctggtatgcgaatcgatcatttt
ctactttctccagaactgatacctcatctgaaaactggcggcgtagataaggaagttcgt
gggtgggaaaagagtagtgatcatgtgccgacttggatagagctggagaatttataa
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