Kaistella antarctica: NCTC13489_00645
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Entry
NCTC13489_00645 CDS
T06886
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cant
Kaistella antarctica
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cant03032
]
NCTC13489_00645
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_00645
Enzymes [BR:
cant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC13489_00645
DNA replication proteins [BR:
cant03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13489_00645
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13489_00645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4430
Motif
Other DBs
NCBI-ProteinID:
VEH96928
UniProt:
A0A448NNV6
LinkDB
All DBs
Position
1:complement(704213..705322)
Genome browser
AA seq
369 aa
AA seq
DB search
MKTTDPSLELITKISPSKILKIMKDPEKSATAVNLIYTNDSENQGIARKKRGKKFNYFSG
EQKIKDQEEIQRINQLAIPPAWENVWICALQNGHLQATGIDAKKRKQYRYHTVWNALRNH
TKFYRMLQFGEALPNIRLHLEQDLAHRKLDKRKVLALVVSLMERTNIRIGNNIYEKLYGS
FGLTTLKDQHVEIKGQKIQFSFKGKKGVYHDIDLKNAKLAKAVKNCRDIPGKELFQFYDD
DGQRHPIESGMVNDYIKEISGENFSAKDFRTWSGTVNALIAFKEIEAQESDDNQKTKIKN
AIEMVACELGNTSTVCRKYYIHPLVINLYENDSIKKYLKELDEIEVDDGKAGLTKEELIV
MKILQNEKP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacagatccttcattggaacttatcaccaaaataagtccttcaaaaattttg
aaaataatgaaggatcctgagaagtctgcaacggcagtcaatttaatttataccaacgat
agcgaaaatcaaggaatcgctcgtaaaaaaagaggcaaaaaattcaactatttttctggc
gaacaaaagatcaaagatcaagaagaaattcagcgaatcaatcaattggcaattccacct
gcttgggaaaatgtctggatttgcgcacttcaaaatggacatttacaagctaccggtatt
gatgcaaaaaaacgcaaacaatatcgttatcataccgtttggaacgctttgagaaatcac
accaaattctatagaatgttacagtttggtgaagcattgccgaatatccgattacattta
gagcaagatctggctcatcgaaaattagacaaacgaaaagttttggctttggtcgttagt
ttaatggaaagaaccaacattcggattggtaataatatttacgaaaaattgtacgggtct
tttggtcttacaactctgaaagatcaacacgtagaaatcaaaggtcaaaaaattcagttt
tcttttaaagggaagaaaggagtttaccatgacatcgatttgaagaacgcgaaattagca
aaggcagtgaagaattgtcgcgatattccaggaaaagaattgttccaattctatgatgat
gacggacaacgccatcctattgaaagtggaatggtcaatgactacattaaagaaatcagc
ggtgaaaactttagcgcaaaagatttccgtacttggtcaggaactgtgaatgcattaatt
gcgtttaaagaaattgaagcccaagaaagcgatgataatcaaaagactaaaattaaaaat
gccatcgaaatggtggcctgcgaactaggaaatacgagcacggtttgccgaaaatactat
attcatcctttagtaatcaacctttatgaaaatgattctattaaaaaatatttaaaagaa
ttagatgaaatcgaagttgatgatggtaaagctggtttgacgaaagaggaattgattgta
atgaaaattctgcaaaacgaaaaaccgtaa
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