Kaistella antarctica: NCTC13489_00972
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Entry
NCTC13489_00972 CDS
T06886
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cant
Kaistella antarctica
Pathway
cant03420
Nucleotide excision repair
cant03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13489_00972 (pcrA)
03430 Mismatch repair
NCTC13489_00972 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_00972 (pcrA)
Enzymes [BR:
cant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13489_00972 (pcrA)
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13489_00972 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC13489_00972 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEH98436
UniProt:
A0A3S4UXM9
LinkDB
All DBs
Position
1:complement(1059796..1062129)
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AA seq
777 aa
AA seq
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MQMDYLKGLNKPQYEAVTSLEGPLMVLAGAGSGKTRVLTMRIAHLITNLVDPFNILALTF
TNKAAKEMKERIAKVVGQSEARSLWMGTFHSVFARILRSEAHYIGFPSNFTIYDSQDSLN
VIRKVLKELNIDGDLYKPKKVQARISSYKNNLITVKAYFNNPELIEADERANMKSIGAIY
QKYVDVCFRNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVK
ALASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAAN
VVISKNLQQFKKNVFSDNEEGEKIKVYRSLSDADEANFVASNIWEQHNSDQKKFTDFAIL
YRTNSQTRAFEDALRRKNIPYRVFGGLSFYQRKEVKDLIAYLRLLVNENDSEALSRIINY
PVRGIGETTQNKLIVFADSQNIAVTQVLDNLGFYAPNLKLNNGILTKLSDFWSMIKAFQV
MLKTENAYNVAMEVAKRSGVIKFLKDDQTPEGISRVENIQELMNSMQGFIEEQQQLEDGD
ASLSSFLENIALSADTQTDKNQDGDQVSLMTIHLSKGLEFPVVHVVGLEENLFPSFMSSS
TREELEEERRLFYVALTRAEKQVFFTYAVSRFQWGKITSAEPSRFLSEVDEQYLEFINPA
TESRFMNNSGLKSSIFDDDNSEPRFFKKKDPKKTIEKNEPAPIPQNLKPVATARIINPSG
NSSQDIEVGDRVRHDRFGVGEVIFLDGTDAQNIKAKVKFQHEGEKNLILKFAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggattatttaaaaggactcaataaacctcaatatgaagctgtaacatctctt
gaaggacctttgatggtgcttgctggagcaggttctggtaaaacgcgcgtgctcaccatg
cgtatcgcccatttgataaccaatttggtagatccttttaatattctggctttaactttc
accaacaaagccgctaaagaaatgaaggaaaggattgcaaaagttgtgggtcaaagtgaa
gcgcgatctctctggatgggaactttccactctgtctttgccaggattttacgatctgag
gcgcactatattgggtttccgtccaactttacgatttacgattcccaagattctctaaat
gtaatcagaaaggttttaaaagaattgaatatcgatggtgacttatacaaaccgaaaaaa
gttcaggcaagaatatcttcttacaaaaataatcttattaccgtaaaagcctatttcaat
aatcccgaacttatcgaagctgatgagcgtgccaatatgaaaagcatcggtgcaatttat
caaaaatatgtggatgtttgtttccgaaatggagctatggattttgatgatttattgcta
agaaccaatgaactgttaacgaggtttcccgaagttcttgccaaatatcaagatcgtttc
aggtatattttagtcgatgagtaccaagataccaaccattcccaatatttaattgtgaaa
gcattagcttcaaaatttgaaaatatttgtgtagtgggagacgatgcgcaatctatttac
tctttccgtggtgcgaatatctacaatatcttaaactttaaaaaagattaccctgatgcc
gtaaccgtttccttggaacaaaattaccgttcgactcaaaatatcgttaatgctgctaat
gttgttatttctaaaaacttacagcagtttaaaaaaaatgtcttcagtgataatgaagaa
ggcgagaaaataaaagtctaccgttctctttccgatgctgatgaggctaattttgtagct
tctaatatttgggaacagcacaattctgaccagaaaaaatttactgatttcgctattcta
taccgtaccaattctcaaacccgtgcctttgaagatgcgctgaggagaaagaatattccg
tatcgtgttttcggtggattatctttttaccaaagaaaagaggtaaaagatcttatcgcg
tatttgcgtctgttggtcaatgaaaatgattctgaagcattgtctagaattatcaattat
cccgtacgtggaattggagaaacaacccaaaataaactgattgtttttgcagactctcag
aatattgcagttactcaagtcttagacaatctcggtttttatgcgcccaacttaaaattg
aataatggaatcttaaccaagctttctgatttctggtcaatgattaaagcatttcaggtc
atgttaaaaactgaaaatgcgtacaatgtcgctatggaagttgccaagcgaagtggagtc
ataaaatttctaaaagacgatcaaactccggaaggaatttcgcgagtagaaaacattcag
gagttgatgaactcgatgcaaggttttatcgaagaacagcaacagttagaagatggcgac
gcgtcactctcgagctttttggagaacattgcgctttccgccgatacgcaaacggataaa
aatcaagatggcgaccaggtttctttgatgaccattcatctatccaaagggctggagttt
ccagtggtgcacgttgttggtctggaggaaaacttgtttccgagttttatgagttcctca
acacgagaagagttggaagaggagagaaggcttttttatgttgctttaaccagagccgaa
aagcaggtcttttttacctacgccgtttcccgttttcaatgggggaaaattacgagcgca
gaaccatcgaggtttttaagtgaagttgatgagcaatatttagagttcatcaatccggcc
accgaaagtcgtttcatgaataattcaggtttgaaatcgagcatttttgacgatgataat
agtgaacctcggttctttaaaaagaaagatcccaagaaaaccatcgagaaaaatgaacca
gctccgatcccgcagaatttaaaaccggtagctacggcaagaattataaatccaagcgga
aattcttcccaagatattgaagtgggtgatcgtgttcgtcatgaccgtttcggcgtggga
gaagttattttccttgatggtactgatgcacaaaacattaaagcaaaagttaaatttcag
catgaaggcgagaagaatttgattctgaaatttgcgaagttgactaaaatttaa
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