Kaistella antarctica: NCTC13489_01507
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Entry
NCTC13489_01507 CDS
T06886
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
cant
Kaistella antarctica
Pathway
cant00061
Fatty acid biosynthesis
cant00540
Lipopolysaccharide biosynthesis
cant01100
Metabolic pathways
cant01212
Fatty acid metabolism
Module
cant_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC13489_01507 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC13489_01507 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cant01005
]
NCTC13489_01507 (lpxC)
01004 Lipid biosynthesis proteins [BR:
cant01004
]
NCTC13489_01507 (lpxC)
Enzymes [BR:
cant01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
NCTC13489_01507 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
NCTC13489_01507 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cant01005
]
Lipid A
NCTC13489_01507 (lpxC)
Lipid biosynthesis proteins [BR:
cant01004
]
Fatty acid synthase
Component type
NCTC13489_01507 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
Motif
Other DBs
NCBI-ProteinID:
VEH99380
UniProt:
A0A3S4WSL7
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All DBs
Position
1:complement(1638383..1639807)
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AA seq
474 aa
AA seq
DB search
MRPTQKIKLMSDKQKTLKEEISLSGIGLHTGREVTLTMKPAKENTGFVFVRTDLEGSPHI
EADVNYVTTTERGTTLEKLGVRIHTCEHLLAALVGCDIDNAILEMDSAEPPILDGSSKFF
VEAIEKAGIKQQEAVREYLIVKEVLSYSDPATGSEITIIPSDTYEVTTMVDFGTKVLGTQ
NATLKDISEFKTEISAARTFSFLHELEMLLDAGLIKGGDISNAIVYVDKELTPEIADKLK
KAFGKDEVSIRPNGILDNLTLNYPNEAARHKLLDVIGDLALVGVKIKGKVIANKPGHFVN
TQFAKKLNRQWKLQKKKNVPDIDIYKEPVYDINGIMRLMPHRPPFLLIDKILELSETHVV
GLKNVTMNEPFFVGHFPKEPVMPGVLQVEALAQTGGILVLASVPDPENYSTYFIKMDKVK
FKKKVVPGDTMVFKIELISPIRRGIVHMQGYGYVGDSVVVEAELMAQVAKNKPE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgagaccaactcaaaagataaaactaatgagtgataaacaaaaaactttaaaagaagag
atttctctttctggcatcggactgcatactggtcgcgaagtaaccttaaccatgaaacct
gccaaagaaaatacaggtttcgttttcgtaagaacggatttggagggaagtccgcacatt
gaggccgatgtgaattatgtaacaaccactgaaagaggtacaactctggaaaaattggga
gtcagaattcatacgtgcgagcatttgcttgccgctctggtaggatgcgatattgataat
gccatcttggaaatggacagtgcagaaccgccaattttggatggttcttctaaatttttc
gtagaagccattgaaaaggctggaattaagcaacaagaagcggtcagagaatatttgatc
gtaaaagaagtcctcagctacagtgatcctgccacgggttcagaaattacaattattcca
tcggatacttatgaagtgaccacgatggttgattttggcactaaagttttaggaactcaa
aatgctactttaaaagatatttcagaatttaaaaccgagatctccgccgcgcgtactttc
agttttctacatgagttagaaatgcttttggatgcgggtttaataaaaggtggcgacatt
tcaaatgccatcgtttacgttgacaaagaattgacgccggaaattgcagacaaattgaag
aaagcctttggtaaagatgaggtttctattcgcccgaatggaattttagacaaccttact
ttaaattatcccaatgaagcggctcgtcataaattactagatgtaatcggtgatttggct
ttggttggtgttaaaattaaaggaaaagttattgccaataaacctggacattttgtaaat
acgcagtttgcgaagaaattaaacagacagtggaaattacagaaaaagaaaaatgttccg
gacattgatatttataaagaacccgtgtatgatattaatggaattatgaggttaatgcct
cacagacctccatttttattgattgataaaattttagaactatctgaaacgcatgttgtc
ggattgaaaaatgtgaccatgaacgaaccctttttcgtgggacattttccgaaagaaccg
gtaatgcctggtgttttacaagtagaagctttggcacaaactggaggaattctcgtcttg
gcgagcgttccagatcctgaaaattactcaacttactttattaaaatggataaagtaaag
tttaagaaaaaagtagttccaggagataccatggttttcaaaattgaattgatatcacct
atcaggagaggaatcgttcacatgcaagggtacggttatgtcggcgacagcgttgtagtt
gaagcagaattgatggcgcaggtggcaaaaaataaaccggaataa
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