Kaistella antarctica: NCTC13489_02572
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Entry
NCTC13489_02572 CDS
T06886
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cant
Kaistella antarctica
Pathway
cant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13489_02572 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cant03019
]
NCTC13489_02572 (recQ_2)
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_02572 (recQ_2)
Enzymes [BR:
cant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13489_02572 (recQ_2)
Messenger RNA biogenesis [BR:
cant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13489_02572 (recQ_2)
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13489_02572 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
HRDC
DEAD
HTH_40
RecQ_Zn_bind
ResIII
GerE
HTH_36
HTH_29
HTH_38
HTH_7
DUF7342
Motif
Other DBs
NCBI-ProteinID:
VEI01151
UniProt:
A0A448NU57
LinkDB
All DBs
Position
1:complement(2765412..2767604)
Genome browser
AA seq
730 aa
AA seq
DB search
MKKSTEILQQYFGYDSFRLNQASAVENVIAKKDTFVLMPTGGGKSLCYQVPALVLDGTAI
VISPLIALMKDQVDALRVNGISAAFLNSSMNPLEQNETFRQLKEDKLKLLYVAPEKLSAD
NGSFLNLLKEINISLFAVDEAHCVSHWGHDFRPDYLFLNGLKKEFPQTPIIALTASADEI
TRKDIIKQLNLQEPAVLISSFDRPNIKYFVQPKQSVLNHVVKYLNEHPNDSGIIYCLSRK
GTEDLANNLKENGVNAAFYHAGISSTERAQVQDDFIKDKIRVMIATIAFGMGIDKSNVRF
VMHADLPKNIESYYQETGRAGRDGLPSEAILFYSNADVMKLKKFAMVEGNEEQSSLMLRK
LQQMTDFAEMQKCRRQYLMEYFGESHPGNCNSCDYCLSDFENWDATEDAQKLLSAVYRLK
ERYGKNLIIDFLRGSKGVKITDYMRNLPTYGIGANADKTYWQNLIKQLVINDFLRDSNEE
FPVLKLTEASKDVLFGKREVNLQKVKEQAQAVTVAEIEISDPSDNIETNLELFDELRILR
RQQAEQENVPPYVIFSDASLMELATYLPNTKEELEQISGFGAFKIEKYGEIFLNVILDFC
NKNNLQSKIAEKTPRIKRAPKKINKYEAGTYTTTFQLYKEGNSVEEIANIRNMSLNTIQN
HLANFVEVGTIKASELMDINKIDPIISIAKTQTILSLKAIKEELGEDYSYFEINVALAFY
KWEEKEKNLK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatctacagaaattcttcaacaatattttggctacgatagtttcagattgaac
caagcgagcgccgttgaaaatgtaattgcaaaaaaagacacgtttgtactcatgccaacg
ggcggtggaaaatctttatgttatcaagttccagccttggttttagacggaacagcaatt
gttatttcaccattaattgcattaatgaaagaccaagttgatgctttgcgagtaaatgga
atttctgcagctttcctcaattcttcgatgaatcctttggagcagaatgaaacttttcgt
caattaaaagaagacaaactcaaacttttatatgttgcgccagaaaaattaagcgcagat
aatggttcatttttaaacttgctgaaagaaattaatatttccctttttgcagtcgatgaa
gctcattgtgtgtctcattggggacacgattttcgtccagattatttatttttaaatgga
ttaaaaaaagaatttccgcaaactccaattattgctttaactgcaagtgctgatgaaatt
acgaggaaagatatcattaaacaactcaatcttcaagaaccggctgttttaatctcctct
tttgataggcccaatattaaatactttgtacagccgaaacaatctgtgctcaatcacgtt
gttaaatatctcaatgagcatccaaatgactcgggaattatttactgtttgtcccgaaaa
ggaaccgaagatttggcgaataatttaaaagaaaacggtgtcaacgctgctttttatcat
gcagggatttcttctactgaacgagcgcaggttcaagacgacttcatcaaagataaaatc
agagtgatgattgctaccattgcatttggaatgggaatcgacaagagtaatgtccgtttt
gtaatgcacgcagatcttccgaaaaacatagaaagttattaccaggaaacaggaagagcc
ggcagagatggattaccaagtgaggcgattttattttactccaatgccgatgtgatgaag
ttgaaaaaatttgcaatggtggaaggtaacgaggaacaatcatccttaatgctgcgaaaa
ttgcagcaaatgaccgactttgccgaaatgcaaaaatgcagacgacaatatctgatggaa
tattttggagaatcccatcctggcaattgtaattcttgtgattattgtctcagtgatttt
gaaaattgggatgctactgaagatgctcagaaattattaagtgccgtttatcgattgaaa
gaacgatatggaaaaaatttaattatcgatttccttcgcggttcgaaaggggtgaaaatt
accgattatatgcgcaatttgcccacttatggcattggtgccaacgcggacaaaacgtac
tggcaaaatctaataaagcagttagtgattaatgattttctacgtgattcgaatgaagag
tttccagtactaaaactaacagaagccagtaaagacgtcttatttggcaagagagaagta
aaccttcaaaaagtaaaagaacaagcccaagcagtaactgtggcggaaatagagatttct
gatccttccgataatatagaaacgaatctggaattatttgacgaattaagaattttaaga
agacaacaagccgagcaagaaaacgtaccaccttatgttattttttccgatgctagtttg
atggaactggcaacatatcttcctaatacaaaagaagaactcgagcagataagtggtttc
ggagcctttaaaatagaaaaatacggcgagatatttttaaatgtaatattagacttttgc
aacaaaaataatttacagagcaagattgccgaaaaaacaccgagaataaaacgcgcaccc
aagaaaataaataaatatgaagcgggaacatataccacaacttttcaattatacaaagag
ggaaacagcgtagaagaaatcgcaaatatcagaaatatgtctttaaataccattcaaaat
cacctggctaatttcgtggaagtgggaacaattaaagctagcgaattaatggatatcaat
aaaatagatcctatcatttctattgcaaaaactcaaactattctgtctttaaaggcgata
aaagaagaattgggcgaagattattcttactttgaaattaatgttgcgcttgctttttat
aaatgggaagaaaaagaaaaaaatttaaaataa
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