Kaistella antarctica: NCTC13489_02877
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Entry
NCTC13489_02877 CDS
T06886
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cant
Kaistella antarctica
Brite
KEGG Orthology (KO) [BR:
cant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cant03400
]
NCTC13489_02877 (sbcD)
DNA repair and recombination proteins [BR:
cant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13489_02877 (sbcD)
Archaeal homologous recombinant proteins
NCTC13489_02877 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
DUF1574
Barstar
UBA_7
Motif
Other DBs
NCBI-ProteinID:
VEI01619
UniProt:
A0A448NV05
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Position
1:complement(3087636..3088841)
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AA seq
401 aa
AA seq
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MKILHTADWHLGKRLDRFSRLEEQILVMDEIVQIADEQNVDIVLVAGDLFDNFNPSVEAI
ELFYKTLKRLSQNGKRPVIAISGNHDSPYLIDAPDPLARECGIILIGHPKAKVTPFELED
FEISNSVEGMIELKLKNHDFPIRIVHTAFANEIRLKEYFGENKEEALNQVLAENWATIAD
EFCDENGVNILLTHLYMNKRGAPILEEPDGEKPIKIGNADLIYSDTIPPQIQYTALGHLH
AFRNIGTEEKPVVYSSSPLCYSFSEAGQTKYVSIIEAHPNQEVSYEKIALKNGKALVRKN
FDQVEKAIEWLSENQNTLVELTLESETYLKAEERKVINNTHHGIVHLIPKVKNQEFNQKQ
LHDINLNQDIQSLFKDYFKSKNNAQEPYEDLLNLFNEILNA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgcataccgccgattggcatttgggtaaacgtttggaccgtttttcacgc
ctggaagaacaaattctagtcatggacgaaatcgttcagattgccgatgaacaaaacgta
gatatcgttttggtagcgggagatttattcgataattttaatcccagcgttgaggcgatt
gaacttttttataaaaccttaaagcgattgtctcaaaatggaaaacgtcccgtaatcgcc
atttccggaaatcatgattctccctatttaattgatgctccggatccattagcgcgggaa
tgtggaattattttaatcggtcatccgaaagcaaaagtaactccgtttgagcttgaagat
tttgaaatttcaaattcagtggaaggtatgattgaattaaaactcaaaaaccacgatttc
ccaattcggattgtacataccgcttttgccaatgagatcaggttaaaagagtatttcggg
gaaaataaagaagaagcactcaatcaggttttggcggaaaactgggcaactattgcggac
gaattttgtgatgaaaatggcgtcaatattctgttgactcatttgtatatgaataaaaga
ggcgcaccaattctggaagagcctgacggtgaaaaacccatcaaaattggaaatgctgat
ttgatttattcggatacgattccgcctcaaattcaatatacggcgttgggacatttgcac
gcttttcgaaatattggaacggaagaaaaaccagtcgtttattcgtcttcgccgctgtgt
tatagttttagtgaagctggacaaacgaaatatgtttcgattattgaagcgcatcctaac
caagaggtttcttacgaaaagatcgccttgaaaaatggcaaagccttggtgcgtaaaaat
tttgatcaggttgagaaagcgattgaatggttgtctgaaaaccagaatactttggttgaa
ctcactttagagagtgaaacttatttgaaagcggaagaaagaaaagtgatcaataatact
catcacggaattgtgcatcttattcctaaagttaaaaatcaggaattcaatcaaaagcaa
ctgcacgatatcaatctcaatcaggatattcagagtttgtttaaagattattttaaatct
aaaaacaatgcgcaggaaccctatgaagacttactcaatttattcaacgaaattttaaat
gcataa
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