Magallana angulata (Portugese oyster): 128155222
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Entry
128155222 CDS
T09348
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
canu03036
]
128155222
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
128155222
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_29
Motif
Other DBs
NCBI-GeneID:
128155222
NCBI-ProteinID:
XP_052672786
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Position
7:29603354..29616285
Genome browser
AA seq
1110 aa
AA seq
DB search
MSMSAWSAHESKYAFSFKVSREDSNADQQTETQHTISKTGDIPDHHAGVAALEVPVGNSK
RQFDINMNSSGDKSNPPKDPPRMPIVLSNAVYFSKTYRSTNLRKNQDPQSASTDSQRFDI
ANGVQQLRHGVASELLDFSFKKKTKTCTFANTPKSSIQVSDQIDSIDSSSGINRILSTDG
SDERSRNQRSIYSDFSYGITPGTSDSNESGGGSGKSVDRNLRSSTGTSGYSCETDTSSSD
SWAVGRKRGLFMSETPLPGMTPHARVPQGSKLFKTPLNVKRKTPSSSSRMASTLLGSSTG
RSIGSSFVHESGSRSCDPKSTPHTRSAAVNSNSAVIVAIVEGRGMARGEIGLASIDLRSP
TLNLSQFSDTQTYVQTMTKLHRCQPIEIIMPNTACENGAMTKLFKLVTHQFQNSNVSTVQ
RKYFNETKGLQFVKQLCVSDFNSVVMELTTKYYCLAAAAALVKYVEFTQNMILAPASINV
IFSGCENTTMIDATTAVNLELLQNIRDPKSEHTLYGVLNYTKTIGGARLLRANILQPPCD
LGTITMRQEVVSELTEKEDLFDNIQTVIARFLDIDHVLSMCVQIPKQETLKTAEANINNI
IYLKHILELVDPLRNALSNCENRLMKHFYKSLDDGRYALMKAKISSVIHDDTKYQKGMLH
MRTQKCFAVKGSINGLLDIGRGTYAGIIEDINNLANQLAEEYSLPIVTSYNSTRGFFLQL
NCGPKSTYSKESLPGIFIKVTKAKNALCFTTSDLIRLNNRAREALDEIYLVTNIVVTELL
GHLRNHFGCLYKLSEAVSMIDMLQSFAHACTLSSYVKPEFTKDTFAVKQGRHPILERITP
DMPVPNNIYSTEDANFNLITGANMSGKSTYLRQIVLLQIMAQIGCFIPAEYGSFRITDQI
FSRIGSDDDIESNSSTFMLEMKEVNYIIQNVSHRSLIIMDELGRGTSQEEGVGICHSVCE
YLLRFKAFVFFATHFMDIGHLENLYPNVQNYSFMILKTFNENDQSEKVVYTHVLTKGLNK
EEHYGIRLAELSTLPRDVIQQAKTLANSISTKRGKQHEVDKEMREKRIVFKLAARLVQLS
RNSRLSKTDLKSYMKSLKAQYIADTKSLEE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcagcatggtcagcacatgaatcgaaatacgcttttagttttaaggtctca
agagaagattcaaatgctgatcaacaaactgaaacccaacacacaatatctaagacaggg
gatattccagatcatcatgctggagtagctgcattagaagttcctgtaggaaattctaaa
agacaatttgatattaatatgaatagtagtggagacaaatcaaatccaccaaaagatcca
ccaagaatgccaattgttctgtcaaatgctgtctatttttcaaaaacgtacagaagtaca
aacctaaggaaaaaccaggatccacaaagtgcaagcacagacagtcagagatttgatatt
gctaatggtgttcaacagttgaggcatggtgtggcatcagagcttttagatttttccttc
aaaaagaagacaaaaacttgcacttttgctaacaccccaaaatcatcaattcaagtgtca
gatcaaattgacagcatagacagcagttctggtatcaataggatcctgagcacagatgga
agtgatgaaagatctagaaatcaaaggagcatttacagtgactttagttatggaattacc
cccggaacaagtgactccaatgaaagcggaggaggatctggtaaatctgtggacaggaac
ttgaggagtagcaccggtaccagtggatacagctgtgagacagacaccagctccagtgac
tcttgggcagtggggaggaaaagagggttatttatgtctgagacacctctaccaggaatg
acccctcatgccagagtccctcaaggttccaaattgttcaagacaccactgaatgtaaaa
aggaaaactccaagctcctccagtagaatggcatcaactctcttaggaagctcaactggt
agatctattggctccagttttgttcatgaatctggttcaagatcttgtgacccaaagtct
actccacacaccagatcagctgcagttaattctaactcagcagtcattgtggcaattgtg
gaggggcgaggtatggcaagaggagagattggattagccagcatagatttgaggtcccca
acattgaacttatcccagttttcagacactcagacttatgttcagacaatgaccaagctt
cacagatgtcaacctattgagattataatgccaaacacagcctgtgagaatggagccatg
acaaagcttttcaaactagtgactcaccaattccagaattccaatgtgtccacagtacag
agaaagtatttcaatgaaacaaaaggtttgcaatttgtgaaacaactctgtgtttctgat
ttcaattctgtggtgatggagttaaccaccaagtattattgcttagctgcagcagcagct
cttgtaaagtatgtggaatttactcaaaatatgatcttagcaccagcatccatcaatgtc
attttcagtgggtgtgaaaatacaaccatgatagatgccacaacagctgttaaccttgaa
ctcttacaaaacatcagagatcctaagagtgagcacactttatatggagtcttgaattac
acaaagaccattggaggggctcgtttactgagagccaacattctacagccaccatgtgac
ctcggaaccattaccatgaggcaggaagtggtctcagaactgacagaaaaagaggacttg
tttgacaacattcagactgtgattgcaaggtttctggacatcgatcatgttctgtctatg
tgtgtgcaaatcccgaaacaagaaactctaaaaactgcagaggccaacatcaacaatatc
atatacctcaaacacattctagaactggtggaccctctgaggaatgctctctcaaactgt
gaaaatcgactgatgaaacatttctacaagtcgttggatgatggcaggtatgcattgatg
aaggccaagatatccagtgtaattcatgatgacacaaaatatcagaaagggatgctgcac
atgcgtactcagaagtgttttgctgtcaagggaagtatcaatggactccttgacattgga
agagggacctatgctggaattattgaggacatcaacaacctagctaaccaattggcagag
gaatacagtttaccaatagtgacatcctataactcaactagaggcttctttctgcagctc
aactgtggtccaaaaagtacctatagcaaagaaagcttgcctggaatatttatcaaagtc
acaaaagccaagaatgcactttgtttcacaacatcagatttgattcgtttaaataacaga
gcaagagaagcattggatgagatatatctggtgaccaacatagtggtgacagagttgcta
ggacatctaaggaaccattttggctgtctgtacaaattgtctgaagctgtgtccatgatt
gacatgttacagagctttgctcatgcctgtactctgtccagttatgtcaagcctgagttt
accaaagatacatttgctgttaaacaaggtagacatccaatacttgagagaattactcct
gatatgcctgttcccaataacatttattctacagaagatgccaactttaatctcattact
ggtgccaacatgagtggcaagagcacatatctaagacagatagtgttgttacaaatcatg
gctcagattggatgctttatccctgctgagtatggctcctttagaataactgaccagatc
ttctctaggataggcagtgatgatgacatcgagtctaactcctctacattcatgttagaa
atgaaagaagtgaattacatcatacagaatgtcagtcaccggtctcttatcataatggat
gaacttggaagaggaacaagccaagaagaaggagtaggaatctgtcactctgtttgtgaa
taccttctcaggtttaaggcatttgtcttctttgccacccatttcatggacattggccat
ctggagaatttgtatccaaatgtacaaaactacagtttcatgatactcaaaacatttaac
gagaatgatcagagtgaaaaggtggtgtatacccatgtactgacgaaaggtctgaacaag
gaggaacattacggcattagactggctgaactgtcaaccctcccaagagatgtaattcag
caagccaaaacccttgccaattcgatttctacaaagagagggaaacagcatgaagtggat
aaggagatgagagagaaaagaattgtcttcaagctcgcagcgcgattggttcaactgtct
cgtaattccagactcagcaagactgacttgaagtcctacatgaaaagcttaaaggcacaa
tatattgcagacaccaaatctctagaagaatga
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