Magallana angulata (Portugese oyster): 128155401
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Entry
128155401 CDS
T09348
Name
(RefSeq) thyroid hormone receptor beta-A-like
KO
K08362
thyroid hormone receptor beta
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04080
Neuroactive ligand-receptor interaction
canu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128155401
04081 Hormone signaling
128155401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128155401
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
canu03310
]
128155401
Transcription factors [BR:
canu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128155401
Nuclear receptors [BR:
canu03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
128155401
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Paralog
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-GeneID:
128155401
NCBI-ProteinID:
XP_052673051
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Position
7:complement(55826486..55841066)
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AA seq
479 aa
AA seq
DB search
MDIRLGCDKNEFVDGMNRGFMPYFPPAMIQHSQTSSFVLPEYKQVLPQRSSQREESSNED
GTAHYSGLSAVSKPSPENSMPSPSSATSSSSPASSQASSDAGGSDGAGGNKRKGTPYIPS
YMDLTNGPEPCVVCGDAATGYHYRCMTCEGCKGFFRRTIQKNLQYHCKWNKMCSIDKNSR
NQCQECRFRKCLNVGMATDLVLNEKQRKAKRKLIEENREKRKQDNVKVKPKPMEACNHDS
LTETDKTIITEVTSAYEQTAVKVPIKEPVSQDDLISSDPEAWQQLAEAMTPSIVKVVEFA
KNVPGFIQLFVDDQILLLKSCCMEIMCLRAACRYDPEKETITMHNGVCLHKSQLKSEGLG
LLVEPIFEFAVGLSKLKLDKTELALLAAVLLMQSDRSGLKEPEAVEKLQDSILGAFKRYI
ATKRPHQPVHWAKILMKVTDLRTISTRHAERVLCIRLDHQGDIPPQLLDLFNEGQTYYS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgtttgggttgtgacaaaaatgagtttgttgacggaatgaatcgaggattc
atgccatactttccgcctgccatgatccaacattcgcagacatcatcgttcgttttaccg
gagtacaagcaagtgttaccacagagatcctctcagagggaggaaagtagcaatgaagat
gggacagctcactactccggtctttctgctgtgtccaaacccagtccggaaaactccatg
ccctccccatccagcgcgacgtcatcttcatcgccggcgtcgtcacaagcctcgtctgac
gccgggggtagtgacggtgccggggggaataagagaaaaggaacaccgtacatcccgagt
tatatggacctgaccaatggaccagaaccttgtgttgtgtgtggcgacgccgccactggc
taccactatcgctgtatgacctgcgaaggttgcaagggatttttccgccgcactatacag
aaaaacctccagtaccattgcaagtggaacaaaatgtgttcgatcgataagaattctcgt
aaccagtgccaagagtgtagatttagaaaatgcttaaatgttggcatggcaacggatctt
gtattaaatgagaagcaaaggaaagctaagagaaaactgatagaagaaaacagagaaaaa
cgaaaacaagacaacgttaaagttaaaccgaaacctatggaggcatgtaaccatgatagc
ctgacagaaaccgacaaaacaatcataacggaagtgacgtcagcgtatgaacagactgct
gtcaaagtgccaatcaaagaacccgttagccaggatgacttaatttcctccgaccccgaa
gcttggcagcagttggcagaagccatgacaccctctattgtaaaggttgtggagtttgcc
aaaaacgtaccgggatttatccaattgttcgtggacgaccaaatcctgttgctgaagtct
tgttgcatggagatcatgtgtctgcgagcagcctgccggtacgacccagaaaaggagacc
atcactatgcataatggcgtctgtctacacaaatcacagctcaaatctgaggggctgggc
cttcttgtcgaaccaatatttgagttcgctgttggtttgtccaaactcaagttggacaaa
acagaacttgcgttgcttgcagctgtgttgttgatgcaatcagatcgctcagggttaaag
gaaccggaagctgtggagaaactccaggattccattctcggagcgtttaagcgttacata
gcaaccaagcgcccgcaccagcccgtacactgggcaaagattctgatgaaagtgacagac
ctccgtactatcagcacccgccatgccgagcgtgttttgtgtatccggcttgatcaccaa
ggtgatattcctccgcagctcctggacttgtttaacgagggacagacatattatagctga
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