Magallana angulata (Portugese oyster): 128156139
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Entry
128156139 CDS
T09348
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128156139
03012 Translation factors [BR:
canu03012
]
128156139
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128156139
5.6.2.5 RNA 5'-3' helicase
128156139
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Other ribosome biogenesis factors
128156139
Translation factors [BR:
canu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128156139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
Viral_helicase1
DEAD
UvrD-helicase
nSTAND3
Znf_XAF1_N
AAA_16
SLFN-g3_helicase
NAT10_TcmA_helicase
T2SSE
nSTAND_NTPase5
Zot
AAA_25
AAA
Rib_recp_KP_reg
Flavi_DEAD
IstB_IS21
ABC_tran
UvrD_C_2
AAA_22
PhoH
LisH_PAC1
AF1548-like_C
zf-C2H2_ZN292
ATPase
DUF4265
Herpes_ori_bp
NPHP3_N
Glyco_tranf_2_3
CbiA
Motif
Other DBs
NCBI-GeneID:
128156139
NCBI-ProteinID:
XP_052674123
LinkDB
All DBs
Position
7:complement(11223520..11238043)
Genome browser
AA seq
1005 aa
AA seq
DB search
MSLEKFVNQHIQLLDKEREAEIEETRHVNETLPPKELQRRGVCLLKLHIRSRRTGFYGRT
VVTFEPGGALQELPAHNITPGDIVSLTASSAHQGDEGFGSGIVTHAGKSAISVAFDDKED
LYDLQEEDLYKLTKLANDVTYKRLKNALNNLKKGDFGGSSRLVDVLFGETDLSSPYNLKD
IHLVNSGLDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPS
NIAVDNLVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEETRLVEDVRKDLDKNL
SAIRKTRDHGEKQKIREDVKYLRKELRQREEAASKEVLKRADVVLATLSSADPRGPIRYL
DNEHFDLVVIDECSQAVEAACWIPLLRAPRCVLAGDHLQLPPTILSKEAASAGLETTLME
RLLDLYGGKVMRMLTTQYRMHQLIMQWSSDQLYEGKLTAHSSVATHLLRDIEKVEETEET
SEPLLLIDTAGCQLYELDVPEEISKGNEGEADIVSSHVEKLIKLGLNQEEIAVIAPYNLQ
VELLRLRLSSDYPKVEIKSVDGFQGREKEAVIISMVRSNKKGEVGFLAEKRRINVAITRA
RRHLAVVCDSETVGHDAFLKSLVDYMSANGVVKTAQEFVEAGIVYNKVTRPDHLNDLLTL
PSNNKGAKPKSAKNQKKSQNKQKPAKTEGQIPEAEKYQKTEEETNERIKEFQGYLDTFVQ
EPSSGELEFPSSLNSHDRMLVHELSEKMGLIHISKGAGKERHIVVSKPGGGGGHDVVKCS
SKQHLEKEKISEEKVAGAQNVELPSQAEEEFPEDKESQAAPNQKEPDKIVCRLCSKSVIK
ANIQLHETHCLRMQRQKSAPKSADSSSKKHKDQSTPRAPNAHADVVAKLEKVDGDDLDSM
IAAVQSVDRECSFKKCKTSTRTLGHNCEFCRRRFCLNHHIPEVHGCGDAAKAHARATIIR
EGVLYRGSGVPDKRPDPTRKAQLQKKLDKKLTDMATKRQGKKQKK
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagaaaaatttgtaaaccaacacattcagcttcttgataaggagcgagaggct
gagatagaagagacgagacatgtcaatgaaacattgccaccaaaggagcttcaaaggaga
ggagtttgtttgctgaagcttcatattagatcccgtcgaactggcttttatgggagaaca
gttgtcacgtttgaaccaggaggagcactccaagagttacctgcccataatattacacct
ggtgatatagttagcctgactgccagctcggcccatcaaggcgatgagggttttgggtca
ggcattgtgacacatgctggaaagtcggccattagtgtagcatttgatgacaaggaggat
ttgtatgatttacaggaggaggatctctacaagcttaccaagcttgctaatgatgtcacg
tacaaacgactaaaaaatgcactgaataatctgaaaaagggtgattttggtggatcaagt
agacttgtggatgtgttgtttggagaaacagacctgtcttctccttacaacctcaaagac
atccacctggtaaattctggactggatgagtcacaagaagatgctgttaggtttgctctt
gctcagccagaagtagccattgtgcatggtcctccaggcacagggaagaccactactgtc
atagaaatcatcatccaggctatcaagcagggcaacaagattttggcttgtgcaccatct
aacattgctgttgacaatttagtggaacgactggcccagcataaacaaaaggtggtgcga
cttggtcatccagcaagagttctgccacatatacagaaatattctctagatgctatcttg
tcttccagtgaagaaacacgtttagtggaggatgtccgcaaagatcttgataaaaatctg
tctgccattagaaaaaccagagatcatggagaaaagcaaaaaatacgagaagacgtaaag
tatttacgaaaagaattgagacagagggaggaagctgcctccaaagaagtcctgaaaaga
gctgatgttgtcttagcaacccttagctcagctgacccgagaggaccaattagatatctc
gataatgaacactttgatctggttgtgattgatgaatgttcacaggcggttgaggcggcc
tgttggattccccttttgagggccccacggtgtgttttagctggagaccatttacagctt
ccacccacaatactcagcaaagaagctgctagtgccggcctagagacaaccttgatggag
agacttcttgacctttatggtggcaaggtcatgaggatgctgaccactcagtacaggatg
caccagctgatcatgcagtggtcctcggatcagctgtacgagggcaagctcactgctcac
tcctcagtggctacacatctcctcagagacattgaaaaggtggaggagactgaggagaca
tcggagccgctgttgttgattgacacagcaggttgtcagctttatgaactcgatgtcccc
gaggaaatctctaagggaaatgaaggtgaggcagacattgtcagcagccatgttgaaaaa
cttatcaaactaggattgaaccaggaggagatagcagttattgccccatacaacttacag
gttgagctgttgagattacgactttccagtgattatccaaaagtggaaatcaaatcagtg
gacggatttcaaggaagagagaaggaggctgtcattatatccatggtcaggagtaacaag
aaaggtgaagtaggatttctagcagaaaagagaagaatcaatgtagccataaccagagcg
cggcgccacctagcagtggtgtgtgatagtgagacagtggggcacgacgccttcctcaaa
tctctagtggactatatgtcagctaatggggttgtgaaaacggctcaggaatttgtagag
gctggaatcgtatataacaaagtaacaagaccagatcatctcaatgacctcttgacctta
ccaagcaacaacaagggagcaaaaccaaagtctgccaaaaaccaaaagaaatctcaaaac
aagcagaaaccagccaagacagaaggccaaattcctgaagcagagaaatatcaaaaaaca
gaagaagaaacaaatgaaaggatcaaagaatttcagggatatttagatacatttgtacag
gaaccatcttcaggagagttggaatttccttcctccctgaactcgcatgataggatgctt
gttcatgagttgtcagagaagatgggactgatacacattagcaaaggggctggcaaagag
agacatatagtggtgtcaaaaccaggtggtggtggtggccatgatgttgtcaagtgttca
tcaaaacaacatttagaaaaggaaaagatttcagaggagaaggtagctggagcacaaaat
gtggagctaccatctcaggcagaggaagaatttccagaggataaggaatcacaagctgct
ccaaatcagaaagaacccgataaaattgtgtgtagactttgcagcaagtcagttattaaa
gcaaacattcagttacatgaaactcactgtttacgaatgcagagacagaaatctgcaccc
aaatctgctgattctagtagcaaaaagcataaagatcaaagcacaccaagagcaccgaat
gcccatgcagatgtggtagccaaattggagaaggtggatggtgatgatttggacagtatg
attgctgcggttcagagcgtggatagggagtgtagttttaagaaatgtaagaccagcact
agaacactgggtcataattgtgaattctgtaggagaaggttctgtctcaatcatcacata
ccggaagtccatggatgtggagatgcagcaaaggcccatgcccgagcaacaattatcaga
gagggggtgctgtacagaggtagtggggtgcccgacaaaaggcctgaccccacacgcaag
gcccaacttcaaaagaagttggataaaaaattaactgatatggctaccaaacggcagggc
aagaaacaaaagaaataa
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