KEGG   Magallana angulata (Portugese oyster): 128156308
Entry
128156308         CDS       T09348                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
canu  Magallana angulata (Portugese oyster)
Pathway
canu03440  Homologous recombination
canu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    128156308
   03450 Non-homologous end-joining
    128156308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:canu03032]
    128156308
   03400 DNA repair and recombination proteins [BR:canu03400]
    128156308
DNA replication proteins [BR:canu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    128156308
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     128156308
    BRCA1-C complex
     128156308
   NHEJ (non-homologous end-joining)
    MRX complex
     128156308
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SbcC_Walker_B AAA_21 AAA_15 ABC_tran AAA_13 AAA_29 DotD AAA_16
Other DBs
NCBI-GeneID: 128156308
NCBI-ProteinID: XP_052674352
LinkDB
Position
7:complement(8110801..8134464)
AA seq 1312 aa
MSRIEKMSIQGIRSFGPDDSDKGIISFFMPLTLILGPNGTGKTTIIECLKYMTTGVMPPG
SKGGAFIHDPKVAHERQVKAQIRLQFRDVTNNRMVIQRIMEATQKLKKIEMKTLDGVITR
YDVNGEKKSIGSKCAEIDREMITSLGVSKPVLENVIFCHQEDSNWPLSEGKALKEKFDAI
FASTRYVKALETIRKVKQMQDQELKLYKQEVTHLKQLKDKSEQLEADKNERETKMMVCRE
SVEKIESKLRPVIEKLDQIGNQSDKIYKIQTSIEKHRSEMNMMENSATELRGQIKNEFQG
SVEELQKKIAEFGNMVQERQETMEQFQMLQRELNKELEKLGQEKGNLLMEVGKLEQESER
YKENMKRRDNEIKKLSTKYDIEGYSRGSLSDEQYEAFMDLIRGKIETLLEDGKKVKMEFE
DKDANMQQKLDDVRDKKTKLEQNERLKRDLMTENTQKIKQLNKKLSEVEASAGRRDQITR
DLKRAEFELSKAEKTVDVNKVKQEIESLSKEKSKLDANISELSSEMNRLHLQSSARAQLD
VLKKDKVTKEEQIRRLRAKQEDTLTYLLGHMPVRNVRGELDEYIGKQTESVKRLNQEIQK
SKSALSSREAEKKMIGETLKKKEEELKNVEEKIFSVCGSQNFDDGLSSLQEKMSSAQDQR
GSLLGAEHFFQKYVNDLEKQEPCCPLCHREFDTDQEVKELIIELKNKLRMVPSKLLKTEK
DLDEFRTKYDAMMQLKPLKENITTLEDKEVPELKNKLKKINEDITKLREDIQTKEEDLHT
QEQDDESAKQIQPDIVMMDRYQGEVTELEKKISTEGAKLSGGDSDRTLQDVINEKEDLQL
KVDSSNKQLDSLRQKINLHTEEVQRLKSEVNQLTSEKLQIDSDLQQRNKLEEDKAKFLSE
NDQYNKEITESKDQIKPLQNQLEKLKREKDKILQEKEEQMEHMKNEVDKVKNDTAKVKNV
NLEIKNYNQSGKAELLVENKKRLTQIEEKAAEKEEESKDYTASLNKLRDELAKNAERERE
LTDNLRLRRHLQDIEKKKENIAKLESELGGIDAKHLERERRRLMAEQQDLLKEKQLSENR
RMALNGELSSLLSELKSDMYKNASTKFRDKMIVLKTTELASSDLEKYYKALDKAIMSYHN
MKMDEINKIIRELWRNTYKGNDIETIEIRSDEDEAGLMKARRTYNYRVVMIKGDTALDMR
GRCSAGQKVLASLIIRMALAETFCLNCGILALDEPTTNLDRENIESLALALVEIIKSRSS
QKNFQLVVITHDEDFVELLGRSDYVDEFWKVRKDANACSKLVKARVEDLHSR
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtctaggattgagaagatgtcaatccaagggatccggagttttggccctgatgactca
gacaaaggaataataagtttcttcatgccactgactcttattcttggtcccaatggaaca
gggaaaacgacaataattgaatgtctgaagtacatgacaactggggttatgccccctggt
agtaaaggtggcgcttttattcacgaccccaaagtagcccatgagcgtcaggtcaaggct
cagattcgcctacagttccgtgatgtcaccaacaaccgtatggtcatacaacgaatcatg
gaggccactcagaagttgaagaagatagagatgaagacattagatggagttatcacacgc
tatgatgttaacggtgaaaaaaagagcatcggttccaagtgtgctgaaatagatagggag
atgattacatctcttggagtgtctaagcctgttctggaaaatgtcatcttttgtcaccaa
gaggattccaactggccactgagtgaagggaaagccctgaaggagaaatttgatgccata
tttgcctccactcgatacgtaaaagctctagaaacaatcaggaaggttaagcagatgcag
gaccaggaactaaagctatacaaacaggaagtgacccaccttaaacaactcaaggacaaa
tcagaacagctggaagctgacaaaaatgaacgtgaaacaaagatgatggtgtgtcgagag
tctgtggagaagattgagtccaagctccgccctgtcattgaaaagctggatcagatcgga
aatcagtcggacaagatttacaaaatacaaaccagcatagagaaacatagaagtgaaatg
aatatgatggaaaactcagcaacagagctccgtgggcagataaagaacgagtttcaaggt
tccgttgaggagttacagaagaagattgctgaatttgggaacatggtacaagagagacaa
gagacaatggaacagtttcaaatgctgcagagagaactgaacaaggagctggagaaactg
ggacaggagaaaggaaacttgttgatggaggttggcaagctggaacaagaatcagagagg
tataaggaaaatatgaagagaagggataatgagataaagaaattgtccacaaagtacgat
attgaagggtacagtcggggaagtcttagtgatgaacagtacgaagccttcatggacctc
atcaggggcaaaatagagacccttctggaggacgggaagaaagtaaaaatggagtttgag
gacaaagatgccaacatgcagcaaaaactggatgatgttcgagacaagaaaacaaagctg
gagcagaatgagcgactgaagagggatttaatgacggagaacactcagaagattaaacag
ctgaacaagaagctgagcgaggtcgaggcttccgccgggaggagggaccagataactcgt
gacctcaagcgagcagaatttgaacttagcaaagcagaaaaaacagtagatgtaaacaaa
gtgaaacaggaaattgaatcactctccaaagagaagtccaaactggatgccaacattagt
gaactcagttcggagatgaatcgcctccacttgcagtccagtgccagggcccagctagac
gtgctgaagaaagacaaggtgaccaaagaggagcagatccgtagactgcgcgccaaacag
gaggacacactgacctacttactgggacacatgcctgtgaggaatgttcggggagaactt
gatgagtatatagggaagcagactgaatctgtgaaacgtttgaatcaggaaatacagaaa
agcaagagtgctctttccagtagagaggcagagaaaaaaatgattggggagactctaaag
aaaaaagaagaagaattaaaaaatgtggaggaaaaaatcttttcggtgtgtggaagtcag
aattttgatgatggtctgtcttcattgcaagagaaaatgtcctcagctcaagatcagaga
ggatccctgttgggggctgaacatttttttcagaagtatgtcaacgaccttgagaagcag
gagccatgctgtcctctatgtcatcgagaattcgacactgaccaagaggtcaaggagctg
attattgagcttaagaataagcttcgtatggtaccaagcaaattactgaagactgaaaaa
gacctagacgaattccgaacaaagtatgatgctatgatgcagctgaagccgcttaaagaa
aatattacaactctagaagataaagaggtcccagagctgaagaacaagttgaaaaaaatc
aatgaagacattactaaactgagagaagacattcaaacaaaagaggaggatcttcacacc
caggagcaagacgatgagtcggcaaaacagatacagccagacattgtgatgatggacagg
taccaaggggaggtaactgagttggaaaagaaaatctcaacagagggcgctaaactgtca
gggggagactctgatagaactctacaagatgttataaatgaaaaagaagatttacaatta
aaagtagactcctctaacaagcagctggatagtctgaggcagaaaatcaacctacataca
gaggaagtgcagcgtttgaaatccgaagtgaaccaactgacgtcagaaaagcttcagatt
gacagtgatttacagcagcgaaataagctggaggaggacaaggcgaagtttctcagtgag
aacgaccagtacaacaaggaaatcacggagtcaaaggatcagattaaaccattacagaat
cagctggagaaattgaagagagaaaaagataagattctacaggaaaaggaagaacaaatg
gaacacatgaagaatgaggtggacaaagtgaagaatgatacagcaaaagtgaaaaatgtc
aacctggaaatcaaaaattacaaccaatcggggaaggcagaactgttagtggagaacaaa
aaacgcctgactcagatcgaggagaaagccgccgaaaaagaggaagaatccaaagactac
accgcaagtttgaacaaactgagggatgagctcgcaaagaatgcggagagggagagagaa
ttgacagataacctaagacttcgccgacatttacaagacattgagaagaagaaagagaac
atagccaagctggagagtgagctgggcgggatcgatgctaaacatctggagcgagagaga
cgtcgattaatggcagagcagcaggaccttctcaaagagaaacaattgtcggagaacaga
aggatggctttaaatggtgagctgtccagtctccttagtgagctcaagtcagacatgtac
aagaatgcaagcaccaagttcagggacaagatgatcgtcctgaaaactacagagttggca
agcagtgacctggagaaatattacaaagcacttgataaagctataatgagttaccataat
atgaagatggatgaaatcaacaagatcatccgagagctgtggaggaacacttataaagga
aatgatatagaaacaatagagattcgttctgatgaggatgaggcagggctgatgaaggcc
cgtcggacatacaactacagggtcgtgatgattaagggggacacagcccttgatatgagg
gggcgctgcagtgctggtcaaaaggtgcttgcatcacttattatacgaatggctctagca
gagacattctgtctgaattgtgggatcttggcccttgatgaaccgacaactaacttggac
cgagaaaacattgagagtttggctcttgcactcgtagaaattatcaagtcgcgatccagt
cagaaaaacttccaactggtggtcatcacccacgatgaggattttgtcgagttgttggga
cggtcagactatgtggatgaattctggaaagttcgaaaagatgccaatgcttgttcaaag
ttggtaaaagcgagagtggaggatctacatagtcggtga

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