Magallana angulata (Portugese oyster): 128156308
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Entry
128156308 CDS
T09348
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03440
Homologous recombination
canu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128156308
03450 Non-homologous end-joining
128156308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
canu03032
]
128156308
03400 DNA repair and recombination proteins [BR:
canu03400
]
128156308
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
128156308
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
128156308
BRCA1-C complex
128156308
NHEJ (non-homologous end-joining)
MRX complex
128156308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_15
ABC_tran
AAA_13
AAA_29
DotD
AAA_16
Motif
Other DBs
NCBI-GeneID:
128156308
NCBI-ProteinID:
XP_052674352
LinkDB
All DBs
Position
7:complement(8110801..8134464)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSIQGIRSFGPDDSDKGIISFFMPLTLILGPNGTGKTTIIECLKYMTTGVMPPG
SKGGAFIHDPKVAHERQVKAQIRLQFRDVTNNRMVIQRIMEATQKLKKIEMKTLDGVITR
YDVNGEKKSIGSKCAEIDREMITSLGVSKPVLENVIFCHQEDSNWPLSEGKALKEKFDAI
FASTRYVKALETIRKVKQMQDQELKLYKQEVTHLKQLKDKSEQLEADKNERETKMMVCRE
SVEKIESKLRPVIEKLDQIGNQSDKIYKIQTSIEKHRSEMNMMENSATELRGQIKNEFQG
SVEELQKKIAEFGNMVQERQETMEQFQMLQRELNKELEKLGQEKGNLLMEVGKLEQESER
YKENMKRRDNEIKKLSTKYDIEGYSRGSLSDEQYEAFMDLIRGKIETLLEDGKKVKMEFE
DKDANMQQKLDDVRDKKTKLEQNERLKRDLMTENTQKIKQLNKKLSEVEASAGRRDQITR
DLKRAEFELSKAEKTVDVNKVKQEIESLSKEKSKLDANISELSSEMNRLHLQSSARAQLD
VLKKDKVTKEEQIRRLRAKQEDTLTYLLGHMPVRNVRGELDEYIGKQTESVKRLNQEIQK
SKSALSSREAEKKMIGETLKKKEEELKNVEEKIFSVCGSQNFDDGLSSLQEKMSSAQDQR
GSLLGAEHFFQKYVNDLEKQEPCCPLCHREFDTDQEVKELIIELKNKLRMVPSKLLKTEK
DLDEFRTKYDAMMQLKPLKENITTLEDKEVPELKNKLKKINEDITKLREDIQTKEEDLHT
QEQDDESAKQIQPDIVMMDRYQGEVTELEKKISTEGAKLSGGDSDRTLQDVINEKEDLQL
KVDSSNKQLDSLRQKINLHTEEVQRLKSEVNQLTSEKLQIDSDLQQRNKLEEDKAKFLSE
NDQYNKEITESKDQIKPLQNQLEKLKREKDKILQEKEEQMEHMKNEVDKVKNDTAKVKNV
NLEIKNYNQSGKAELLVENKKRLTQIEEKAAEKEEESKDYTASLNKLRDELAKNAERERE
LTDNLRLRRHLQDIEKKKENIAKLESELGGIDAKHLERERRRLMAEQQDLLKEKQLSENR
RMALNGELSSLLSELKSDMYKNASTKFRDKMIVLKTTELASSDLEKYYKALDKAIMSYHN
MKMDEINKIIRELWRNTYKGNDIETIEIRSDEDEAGLMKARRTYNYRVVMIKGDTALDMR
GRCSAGQKVLASLIIRMALAETFCLNCGILALDEPTTNLDRENIESLALALVEIIKSRSS
QKNFQLVVITHDEDFVELLGRSDYVDEFWKVRKDANACSKLVKARVEDLHSR
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggattgagaagatgtcaatccaagggatccggagttttggccctgatgactca
gacaaaggaataataagtttcttcatgccactgactcttattcttggtcccaatggaaca
gggaaaacgacaataattgaatgtctgaagtacatgacaactggggttatgccccctggt
agtaaaggtggcgcttttattcacgaccccaaagtagcccatgagcgtcaggtcaaggct
cagattcgcctacagttccgtgatgtcaccaacaaccgtatggtcatacaacgaatcatg
gaggccactcagaagttgaagaagatagagatgaagacattagatggagttatcacacgc
tatgatgttaacggtgaaaaaaagagcatcggttccaagtgtgctgaaatagatagggag
atgattacatctcttggagtgtctaagcctgttctggaaaatgtcatcttttgtcaccaa
gaggattccaactggccactgagtgaagggaaagccctgaaggagaaatttgatgccata
tttgcctccactcgatacgtaaaagctctagaaacaatcaggaaggttaagcagatgcag
gaccaggaactaaagctatacaaacaggaagtgacccaccttaaacaactcaaggacaaa
tcagaacagctggaagctgacaaaaatgaacgtgaaacaaagatgatggtgtgtcgagag
tctgtggagaagattgagtccaagctccgccctgtcattgaaaagctggatcagatcgga
aatcagtcggacaagatttacaaaatacaaaccagcatagagaaacatagaagtgaaatg
aatatgatggaaaactcagcaacagagctccgtgggcagataaagaacgagtttcaaggt
tccgttgaggagttacagaagaagattgctgaatttgggaacatggtacaagagagacaa
gagacaatggaacagtttcaaatgctgcagagagaactgaacaaggagctggagaaactg
ggacaggagaaaggaaacttgttgatggaggttggcaagctggaacaagaatcagagagg
tataaggaaaatatgaagagaagggataatgagataaagaaattgtccacaaagtacgat
attgaagggtacagtcggggaagtcttagtgatgaacagtacgaagccttcatggacctc
atcaggggcaaaatagagacccttctggaggacgggaagaaagtaaaaatggagtttgag
gacaaagatgccaacatgcagcaaaaactggatgatgttcgagacaagaaaacaaagctg
gagcagaatgagcgactgaagagggatttaatgacggagaacactcagaagattaaacag
ctgaacaagaagctgagcgaggtcgaggcttccgccgggaggagggaccagataactcgt
gacctcaagcgagcagaatttgaacttagcaaagcagaaaaaacagtagatgtaaacaaa
gtgaaacaggaaattgaatcactctccaaagagaagtccaaactggatgccaacattagt
gaactcagttcggagatgaatcgcctccacttgcagtccagtgccagggcccagctagac
gtgctgaagaaagacaaggtgaccaaagaggagcagatccgtagactgcgcgccaaacag
gaggacacactgacctacttactgggacacatgcctgtgaggaatgttcggggagaactt
gatgagtatatagggaagcagactgaatctgtgaaacgtttgaatcaggaaatacagaaa
agcaagagtgctctttccagtagagaggcagagaaaaaaatgattggggagactctaaag
aaaaaagaagaagaattaaaaaatgtggaggaaaaaatcttttcggtgtgtggaagtcag
aattttgatgatggtctgtcttcattgcaagagaaaatgtcctcagctcaagatcagaga
ggatccctgttgggggctgaacatttttttcagaagtatgtcaacgaccttgagaagcag
gagccatgctgtcctctatgtcatcgagaattcgacactgaccaagaggtcaaggagctg
attattgagcttaagaataagcttcgtatggtaccaagcaaattactgaagactgaaaaa
gacctagacgaattccgaacaaagtatgatgctatgatgcagctgaagccgcttaaagaa
aatattacaactctagaagataaagaggtcccagagctgaagaacaagttgaaaaaaatc
aatgaagacattactaaactgagagaagacattcaaacaaaagaggaggatcttcacacc
caggagcaagacgatgagtcggcaaaacagatacagccagacattgtgatgatggacagg
taccaaggggaggtaactgagttggaaaagaaaatctcaacagagggcgctaaactgtca
gggggagactctgatagaactctacaagatgttataaatgaaaaagaagatttacaatta
aaagtagactcctctaacaagcagctggatagtctgaggcagaaaatcaacctacataca
gaggaagtgcagcgtttgaaatccgaagtgaaccaactgacgtcagaaaagcttcagatt
gacagtgatttacagcagcgaaataagctggaggaggacaaggcgaagtttctcagtgag
aacgaccagtacaacaaggaaatcacggagtcaaaggatcagattaaaccattacagaat
cagctggagaaattgaagagagaaaaagataagattctacaggaaaaggaagaacaaatg
gaacacatgaagaatgaggtggacaaagtgaagaatgatacagcaaaagtgaaaaatgtc
aacctggaaatcaaaaattacaaccaatcggggaaggcagaactgttagtggagaacaaa
aaacgcctgactcagatcgaggagaaagccgccgaaaaagaggaagaatccaaagactac
accgcaagtttgaacaaactgagggatgagctcgcaaagaatgcggagagggagagagaa
ttgacagataacctaagacttcgccgacatttacaagacattgagaagaagaaagagaac
atagccaagctggagagtgagctgggcgggatcgatgctaaacatctggagcgagagaga
cgtcgattaatggcagagcagcaggaccttctcaaagagaaacaattgtcggagaacaga
aggatggctttaaatggtgagctgtccagtctccttagtgagctcaagtcagacatgtac
aagaatgcaagcaccaagttcagggacaagatgatcgtcctgaaaactacagagttggca
agcagtgacctggagaaatattacaaagcacttgataaagctataatgagttaccataat
atgaagatggatgaaatcaacaagatcatccgagagctgtggaggaacacttataaagga
aatgatatagaaacaatagagattcgttctgatgaggatgaggcagggctgatgaaggcc
cgtcggacatacaactacagggtcgtgatgattaagggggacacagcccttgatatgagg
gggcgctgcagtgctggtcaaaaggtgcttgcatcacttattatacgaatggctctagca
gagacattctgtctgaattgtgggatcttggcccttgatgaaccgacaactaacttggac
cgagaaaacattgagagtttggctcttgcactcgtagaaattatcaagtcgcgatccagt
cagaaaaacttccaactggtggtcatcacccacgatgaggattttgtcgagttgttggga
cggtcagactatgtggatgaattctggaaagttcgaaaagatgccaatgcttgttcaaag
ttggtaaaagcgagagtggaggatctacatagtcggtga
DBGET
integrated database retrieval system