Magallana angulata (Portugese oyster): 128156400
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Entry
128156400 CDS
T09348
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128156400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128156400
Membrane trafficking [BR:
canu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128156400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
Clathrin
WD40_Prp19
zf_RING_Vps8_fungal
Prok-RING_1
ANAPC4_WD40
WDR55
zf-RING_11
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
PHD
Beta-prop_HPS5
Beta-prop_EML
WD40
zf-rbx1
EIF3I
PHD_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
128156400
NCBI-ProteinID:
XP_052674471
LinkDB
All DBs
Position
7:complement(31605518..31623935)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAEETTNSLLNFDIEFDDDEFKSDLPTVDNPTLESILNESEDYESPAEDDTSSVISAVQP
FKDSGDTTSLSSSDSNRTDRSSRSRQKKKIDIQKTIHGSVLKPNRLKNIAAQLLSAADRV
DAGMPTAMAVSSLIAIGTSHGLVLVFDPKQVLKWCLGSTAVGQQYGSVSALSFNKDCTRL
LSGFAKGQITMWDLTNGKLLRTITDAHPPGSAVLHVKFTDSPVLAVCSDSGGSVFELEMK
RLIGVRTCESKCLFSGSRGEVCVVEPLHMNLTIKDHPMQDVMVVAMATLSKVLVVTLRPQ
LKVVFTHPLKGSPTCLPLLAWHFVVIQVSERDRVIDPVLVFARESTIYFFQVICNNAQDI
KCSGLQKITVPYKMLSVAWMNPRVLVTMDTNEKLHVIDVRSEEELEVLDVSSVQLVYNNS
HFKSLATGGNVSQALAMAGEEACYQTVVSQNGQLFLLGTKGVYVYTLRNWRERIDVLVKQ
NKYNEALALALSFYDGRAKAVIGLTASSKNKKEVVSSLMLDLLFEYVDLSMTTLCPEKGK
MEELEAYYQNIVPVCVDYCLHLSRTDILFGRIYDRFAVDYIARGTFLECLEPYILCDKLR
SIPPSVMKDLVEHYQAKNMLEGVESCIVHLEITSLDIHQVVNLCWSHGLYDAIIYVYNKG
MHDYTTPLEELLGILQQAVRTGIQLTDEQIRLGNKLLVYISCCLAGRAYPLGDIPEDMEA
DVKKNVFQCITRMKIKADDSTYPYLRTLLQFDTREFLNVLALAFEEKEFNTEEGIRNRQR
VVDILLQVMVESGEFTPTQIGVLFTFLARQMASHENTILVNRVLFEQVLEFLANPEDDSR
HEERQQALMELLQAGGLQQVNEEKLLSMAENAKFFRVCELLYEKRRQFDKILSCYLRDPS
RKYHAFSYITSILNSERFSVEEQERLKEEAFNQLEELVSIDCKQAAQMVISTMPKNLGVI
ANKMKSNPKVLFEFLKGVMSCRDSGGSAIHTDKQVNIDPWIIELYVDLMCQFRPQEVYNY
IKLNEGYRLEQTLEICRRHKNSEATAYLLEKAGDIQGAFGIILTNLQNKLKALTNELLSP
ESEKDVTVQFLEVQALILVVIQLCQRNSGKMDEAGRESLWFPLLETVMSPQRKLKDLNNK
QIQEDFKKATHHVLNSMMGYIALPTILHKIMQDPAYSTGKFGEVRELILGMLETYNYEQT
LMETCKNLMNHDIHVHLKNLTTAAKKGYVPAGDNCSLCTKQFVNQNETDTVIIFRCGHSY
HKGCLQSIGSVHVIDGEDSWVCFLCSHRKRGQYQSTRFHRSHSNRGQPKGKDITVDPQHS
QALDFVKSFLKTPSRMSLLSELSSSSAPKSHRGSSSIFNQENFQLKLAPPPAMESAP
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaactacaaacagtcttctaaattttgatattgagtttgatgatgatgaa
tttaaatctgacctgccaactgtagataatccaacccttgaaagcattttgaatgagagt
gaagactatgaatctcctgccgaggatgacacatcctctgttatctctgctgtccagcca
tttaaggattcaggggacacaacctccctctctagctccgacagtaatcggacagacaga
agttccaggtccagacaaaagaagaaaattgatattcaaaagacaatacatggctcagtg
ttaaaaccaaatcgtctgaaaaacatagcggcccagcttctcagtgctgcagatagagtt
gatgcagggatgccaacagcaatggccgtttcttccttgatagccattggaacatcccat
ggactggttcttgtttttgacccaaaacaagtgttgaagtggtgcttagggagcacagcg
gtgggtcagcagtatgggtctgtgtccgcgctcagcttcaacaaagactgcacccgactc
ctctcgggttttgccaaaggacagattacaatgtgggacttgaccaatggtaaacttttg
aggacaatcacagatgcccaccccccgggctcagctgtcctccatgttaagttcacagac
agtcctgtgttagctgtgtgtagtgacagtggagggtcggtgtttgaacttgaaatgaag
agattgattggagtgcgaacctgtgaatcaaaatgtctgttctctggaagccggggagaa
gtttgtgtggtagagcccttacacatgaatctgactatcaaagatcacccaatgcaggat
gtaatggtggttgccatggcaacactgtcaaaagtgttggtagtaacattaagacctcaa
cttaaggttgttttcactcatccactaaagggcagtcccacctgcctgcccctgctggcg
tggcattttgtggtcatacaggtgtcggagagggaccgggtcattgaccccgtgctggtg
tttgcccgggagtccaccatctacttcttccaggtgatatgtaacaatgcccaggatata
aagtgttccggtctccagaaaataacagtcccctacaaaatgttgagcgtagcttggatg
aatcccagagtccttgttaccatggataccaatgaaaaactgcatgtcatagatgtcaga
tctgaagaagaacttgaggttttggatgtttcctctgtacagctggtgtacaacaacagt
catttcaagtctctggctacagggggaaatgtcagccaggcactggcgatggcgggagag
gaagcatgctaccagacagtagtcagtcaaaatggacagctcttcttgctggggaccaaa
ggagtgtatgtctacacactgcgcaactggagagagcgtatcgatgtactcgtgaaacag
aacaagtacaatgaggccttggcactagctctgtccttctacgatggccgagccaaggcg
gtgataggactgactgcctcctccaaaaacaagaaagaggtcgtctccagcttgatgttg
gacctcctgtttgagtatgtagatttgtccatgacaacactgtgtccagagaaagggaag
atggaggagctagaggcttactatcagaacattgttccagtatgtgtcgactactgtcta
catctgagtagaacagacatcctgtttgggaggatctacgaccggttcgcagtggactac
attgcccgggggacattcctggagtgcttggagccctacatcctctgtgacaagctccgc
tcgattcctcccagtgtcatgaaggaccttgtggagcactaccaggccaagaacatgctg
gagggggtcgagtcttgtatagtccacctggagatcaccagtctagatatacaccaggta
gtaaacttatgctggtcccatgggctgtatgatgccatcatctatgtctacaacaaaggc
atgcatgactataccactccgctagaggaactgctgggaattttacaacaggccgtccgg
acagggatacagctgacggatgaacagatccgactgggaaataaactcctagtttatatt
agctgctgtttggcaggaagagcctatcctcttggtgacattccagaagacatggaagca
gacgtcaagaaaaatgtcttccaatgcattacacgcatgaagattaaagctgatgattcc
acttatccatatcttcgaacactactacagtttgacaccagagaattcctaaatgtgcta
gccttagcatttgaggagaaagaattcaacacagaagaaggaatcagaaaccgtcaaaga
gtagtggacattcttctgcaagtgatggtggaaagcggggaattcactcccactcagata
ggagttctgtttacgttcctggctcggcagatggcgagtcatgaaaacaccattctggtc
aacagagtcttgttcgagcaggtgttggagtttttagctaaccctgaggatgattctcgc
catgaagagagacagcaggccctgatggagcttctacaagccgggggcctacaacaggtc
aacgaggaaaagttactgtccatggcagagaatgctaaattcttccgtgtctgtgagctg
ctctatgagaagaggagacagtttgacaaaattctgtcctgttacctcagagatccttca
aggaagtaccatgcatttagttacattaccagcatactgaacagtgagagattttctgtg
gaagaacaggaaaggttgaaagaggaggcctttaatcagctagaggagctggtatccatt
gactgtaaacaggccgctcagatggtcatctctaccatgcccaaaaatctgggggtcatc
gccaacaagatgaaaagtaaccccaaggtcttgtttgagttcctgaagggtgtgatgtca
tgcagggattctgggggtagtgcgatacacacagacaaacaggtgaacattgatccctgg
atcattgagctgtacgtggacctcatgtgtcagttcagaccacaggaagtctacaactac
atcaaactgaacgagggataccggctggagcaaactctggaaatctgtaggcgacacaag
aattctgaggccacagcgtacctactagaaaaagcaggagacatccagggggcatttgga
atcattctgacgaacctccaaaacaaactgaaagcattgacaaatgaactactgtctcct
gagtcagagaaagatgtgacagtacagtttctggaggtccaggctctcatcctggttgtg
atccagttgtgtcagaggaattctgggaaaatggatgaggccggtagagagtccctttgg
ttccctctcctggagactgttatgtcaccacagagaaagctgaaggacctgaacaacaaa
caaattcaagaagattttaagaaagctacacaccatgttctgaacagcatgatgggatac
atcgctttacccacaattctacacaaaattatgcaggatccagcatatagtacagggaag
tttggagaagtaagggagttaatactgggcatgttggagacctacaattatgaacagact
ttaatggagacctgtaaaaacttgatgaatcacgatatccatgtccacctgaagaatctg
acgaccgcggccaagaaaggctacgtcccggcgggagacaactgctcgctgtgtaccaag
cagtttgtgaaccagaatgagaccgatacagtcattatattcagatgtggacacagttat
cataaaggatgcctacagtccatcggttcggtccatgtaattgatggcgaggactcttgg
gtctgctttctctgtagtcatcggaaacgcggccagtaccagagcaccagattccaccgt
agtcacagtaaccgcgggcaacccaaaggcaaagatattactgttgatccacaacacagt
caagccttggattttgtgaaaagctttttaaagactccttcaaggatgtctctcctgagt
gaactgtccagttcatcggcccccaagtcacaccgaggatcctccagcatcttcaaccaa
gaaaacttccagctcaaactggcgccccctccagcaatggagtcagcaccatga
DBGET
integrated database retrieval system
