Magallana angulata (Portugese oyster): 128157075
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Entry
128157075 CDS
T09348
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
Organism
canu
Magallana angulata (Portugese oyster)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
128157075
NCBI-ProteinID:
XP_052675391
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Position
7:complement(55715430..55751766)
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AA seq
1297 aa
AA seq
DB search
MWYGNILGLILTQTIFLLTPVRGQDPDGTIDLLSAIGIPDSKRGISYSVGLDGAPAFEFK
ENAVIKEPAQAYFKDQIYKDFAIGITVKPYKRTGGFLFAVKNLYNTVVQFGVELTGNQLK
LHYTLEARYAKSSTVIATFDIGDIYNKWTKLSIKVKDNAVTLYKNCANLGSVAVQGGGGP
MDVEGGANLYVGRAGDNFNNVFAGALQELKVYKEPAEAENFDCDDQLYGSGSGSSGDDKD
PGEPFIPPITPPPPSTYKGEKGERGEQGLKGDKGDQGLPGQTAGPAGDGAKGEKGDQGEP
GIKGDMGLPGIDGATGPPGEPGVEGPPGAPGSPGEKGDAGLPGDPGTPGIGVQGPKGEPG
APAVLNMKDIEDFIQTRIPESGSNGEKGEKGDQGDKGDTGPRGDTGLPGIPGADGLIGPM
GPDGLKGETGDSIVGPAGPPGKDGKPGVPGLKGDSGERGEPGLRGPPGPPGLAVEGSGNG
ESIPGEPGLPGTPGQKGDRGEPGPQGIKGEPGTFDGDINDLIGPRGPAGEPGLPGVPGSA
GVPGKEGPEGPPGLKGDRGDPGLPGVEGRPGSEGPAGVPGDSGPRGLPGAQGLPGTPGQP
GLPGPPGTCSPSSRRGDTGITGLGDDDLEFSGDGCGGGDCTCVGSPGRDGINGTEGPRGL
PGSPGPRGEKGEMGIQGPEGRPGPPGMKGDQGSQGEVGRNGAQGPQGETGAMGSPGLPGV
SGEPGLPGLRGEKGQKGEEGVGIPGKDGKDGAEGPPGPPGPPGPPGQSISIVDPGSGGGE
VIEGAQGPKGEKGDAGLVGTQGIAGLPGVDGMKGDRGDKGDKGDVGDTGIQGLTGNKGDK
GDTGPVGPPGLPGAGSGGSVSGVKGEPGEPGVPGNPGPQGPIGPRGLPGRKGDIGMPGIP
GRIGFRGRKGDRGFGPRGFKGDKGDSGAPGPPGPGLGSSGEIIRGAKGDRGERGLPGLPG
TGVRGERGLPGASGPRGFPGLPGAKGDQGDPGKKGEPSYIQGPPGPPGTPGTPGYSQGGN
GNGKGLVTFKDFNNMLYAAKNLEVGTMTFTLKEEEIYVRVTDGFKQIQGRKISLSSNTIK
LPSEKPTDSTTIATSPTSTSPVTTPKPVPLPGPDSVMQADQPRLYMYALNTPKNGKLRGL
TGADYACYKEAYYSGMHGRTFRAFLASKTQNLYSIVSDRNIPIVNKNDTIIFSSFNDLLR
TGGRFNRNVKIYTFDGEDVMSSPKWPEKMVWHGADSQGNKMNDKECSDWRSDSPNRVGYA
GSLNGGKLVDMHEASCRKELIVLCIEVLPKSRNKPSK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatgggaatatattagggttaattttaacccaaacaatatttcttttgacaccg
gtgcggggacaagatccagatgggacaatagatttactgtcagctattggaatccccgat
agtaagcgaggaatcagctacagcgtagggttggatggggctccagcattcgagttcaaa
gaaaatgctgttattaaggaacctgctcaagcatatttcaaagaccaaatttataaagac
tttgccattggtataactgtgaaaccttataaaagaactggtggatttttattcgcagtg
aaaaacctttataacactgtggtacagtttggtgtcgaattgacagggaaccagttgaag
ttacattatactctagaagctcgctatgcaaagtcatccactgtcatcgctacatttgac
attggagatatttataataaatggaccaaactgtcaataaaagtaaaagataatgcagtg
acattatataagaattgtgccaatttaggatctgtagcggtccaagggggaggcggacca
atggacgtggaagggggagccaacttgtatgtgggacgggcaggggataacttcaacaat
gtatttgctggagccctccaagaactgaaagtatataaagagccagctgaagccgagaac
tttgattgcgatgatcagctgtatggaagtggatcggggtcatctggagacgacaaagat
ccgggcgagccttttattcctccaatcacacctcctcctccatcaacttataaaggggag
aagggtgagcgtggggaacagggattaaaaggagacaaaggtgaccagggcttacctggg
caaactgcaggaccggcaggtgatggagccaaaggtgaaaagggtgatcaaggagagcca
ggaattaagggagacatgggactgccaggtattgatggggcaactgggccacctggagaa
ccaggtgtagagggcccgcctggtgctccagggtccccaggagaaaagggagatgctggt
ctgccaggcgatccaggtactccaggaattggagttcaaggtcctaagggagaacctggg
gcacctgctgtcctaaacatgaaagacattgaagatttcatacaaactcgtatcccagaa
tcaggatccaatggtgaaaagggagaaaaaggagatcagggagacaagggcgatacagga
cctcgaggcgacactggattacctggaatacctggcgctgatggtcttataggtcctatg
ggacctgatggtctcaagggtgaaacaggtgactctattgtgggccctgctggaccacca
ggaaaagacggaaaaccaggtgtaccaggactaaagggagactcaggagagagaggagag
cccggtctcagaggtcctccggggcctcctgggctggctgttgagggatcagggaacggt
gaaagcattcctggtgagccaggtcttcctgggaccccagggcagaagggagacagggga
gaaccaggacctcagggtattaaaggagagcctggaacttttgacggtgacatcaatgat
ctgattggaccaaggggcccagcaggggagccaggtcttcctggagtacctggatcggca
ggtgttcctggaaaggaaggacctgagggacctccaggactcaagggtgaccgtggagat
ccaggcctaccaggagttgagggacgacccggatctgagggaccagctggagttccaggt
gacagtggacctcgtggtctgccaggtgcccaaggtttgccaggtacgcctggtcagcca
gggctcccagggcccccaggaacctgttccccgtcctcaagacgaggagacactggcatt
acagggctgggtgatgatgatctggagttctctggggatggctgtgggggtggggactgt
acatgtgtaggatccccggggcgagatggaatcaatggcacagagggaccacgaggtctc
cctggatctccagggcccagaggagagaagggtgagatgggaattcagggccctgaagga
aggccgggacctcctggcatgaaaggtgaccaaggatcacagggagaagtaggaagaaat
ggggcacagggaccccagggtgagacaggtgcaatgggatctccaggtctaccaggtgtg
tcaggtgaaccaggcctcccaggattacgaggagaaaagggtcagaaaggagaggaggga
gtgggtatcccaggtaaagatggaaaagatggtgcagaaggacccccgggacctcctggt
ccaccaggacctccaggacaatctatcagcattgtcgatccagggtcagggggcggagaa
gtaatagagggagcacagggtcctaagggagagaagggagatgcaggtctagtgggcact
caaggtattgctggtctgccaggtgttgatggaatgaagggagacagaggtgacaagggg
gataagggggatgtcggcgacaccggaattcagggtctcactggtaacaaaggagataag
ggagacacaggacctgttggacctcccggtcttcctggggcaggaagtgggggatcagtg
tcgggtgtgaaaggggaaccaggagagccaggagtacctggtaatccaggacctcaaggt
cctataggacctcgaggattgcctggacgcaagggagacataggaatgccagggataccg
ggtcgcataggtttcagaggaaggaaaggtgatcgtggatttggaccccgaggatttaaa
ggtgataaaggagattcaggtgcccctggacctcctggaccaggtcttggttcaagtgga
gaaatcatcagaggagccaagggagatcgtggggagagaggattacctggactcccagga
acaggtgttcgaggagaaagaggtttaccaggggcctcaggacctagaggcttcccaggc
cttcctggtgcgaagggtgatcaaggagatcctggtaagaagggagagccatcctacatc
caggggccgcctggacccccaggtacccccggcaccccggggtacagtcaagggggtaac
ggaaacggcaaaggacttgttacttttaaagacttcaacaacatgctgtatgcagctaaa
aatcttgaagttggaacaatgacttttactctgaaagaggaagagatctatgtacgagtg
acggatggattcaaacagattcagggtagaaaaatatcgctgagctctaataccatcaaa
cttccttcagaaaaacctacagatagtactaccattgctactagtcccactagtacctcg
cctgtgaccacccctaagccagttcctcttcctggtcctgacagtgtgatgcaggccgac
cagcccaggttgtacatgtatgccttgaatacgcccaagaacggaaagctgcggggtctg
accggggccgactacgcctgttataaggaagcctactactctggcatgcacggaagaacc
ttcagggctttcctggcctccaaaacccaaaacctttactccattgtctccgacaggaat
attcctattgtgaacaaaaatgacacaataatcttcagctcttttaatgacctgttacga
actggaggaagatttaacaggaatgttaagatctatacattcgatggagaagatgttatg
tcaagtcctaaatggccggagaagatggtctggcatggcgctgatagccagggtaacaag
atgaacgacaaagaatgctccgactggcgctcagacagtccaaaccgggtcggatatgca
ggctcgttaaacgggggcaaattagtggacatgcatgaagccagctgccgtaaagagctg
attgtgctctgtattgaggttttaccaaagtcacgtaacaaaccttccaaataa
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