Magallana angulata (Portugese oyster): 128157138
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Entry
128157138 CDS
T09348
Name
(RefSeq) retinoic acid receptor RXR-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128157138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128157138
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
canu03310
]
128157138
Transcription factors [BR:
canu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128157138
Nuclear receptors [BR:
canu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128157138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128157138
NCBI-ProteinID:
XP_052675507
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Position
7:20090965..20107099
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AA seq
476 aa
AA seq
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MVANFKPIETESSLHGLWIPPITDSLDGVSSNSNMSTTANMGMGMSPSMGISSMAQMGSP
PDIKPDINSLVSQSFYPYGIQHPMSQSQASPGSQPMMSPGLHSPSSSVTSPSMMSIGSPG
SASSPPGSNPHMPHSNLNSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACR
DDRNCIIDKRQRNRCQYCRYMKCLNMGMKREDVKCSTDAGRQGSSVQEERQRVKEKGEGE
VESTSTANSDMPVEKILEAELAVEPKTDTYIDAQKDTVTNICQAADKQLFTLVEWAKRIP
HFTELPLEDQVILLRAGWNELLIAGFSHRSIVVKDGILLATGLHVHRSSAHQAGVGTIFD
RVLTELVAKMREMKMDKTELGCLRAIVLFNPDAKGVSAVSEVEQLREKVYASLEEYCKMH
YPDEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLLEMLESPSPSST
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggttgctaatttcaaacctatagagacggaaagtagcttgcatgggttgtggattccg
ccaataacagattctctggatggggtaagcagcaactccaacatgtcaactactgctaat
atggggatgggaatgtctccatccatgggaatcagctcaatggcacagatgggatctcct
ccagacattaaaccagatatcaactctctagtgtcccagtcattttatccttatggaata
cagcaccctatgtcccagtcacaggcgtcccctgggtctcaaccgatgatgtcaccaggt
cttcactcaccctcctcctcagtaacatccccttccatgatgtccatcggttcccctggc
tcagcatcctcacccccggggtccaatcctcacatgccacacagtaatctcaatagcaaa
catatctgtgctatttgtggtgacagagcctctgggaagcactatggagtttacagttgt
gaaggttgtaaaggatttttcaaaagaacagttcgtaaggacttgacgtatgcctgtcga
gatgaccgcaactgtatcattgacaaaaggcagaggaacagatgtcagtactgccgatac
atgaagtgtctaaacatggggatgaagagagaagatgttaaatgcagcaccgatgcaggg
cgccaaggatcatctgtacaagaggaaagacagcgagtgaaggagaagggagagggggag
gttgagagcaccagcactgccaactcagacatgccagtagagaaaatcctggaggctgaa
ctagctgtggaacccaagacagacacctacatagatgctcagaaagatacagtgacaaac
atttgtcaggcagcagacaagcaactgttcactttggtggaatgggccaaacgcatacct
cacttcaccgagttgcctctagaagatcaggtcattctactgcgtgcaggttggaatgag
ctgctgatagctggcttctcacatcgatctatcgtggtaaaggatggtatactgctggcc
accggcctccatgtacacaggagcagcgctcaccaagcaggtgtcggaaccatatttgac
cgtgtcctcacagaacttgtcgctaaaatgcgggaaatgaaaatggataagacagagttg
ggatgtttaagagctatcgtactgtttaatccagatgctaaaggtgtatctgctgtctct
gaagtggaacagttgagagagaaagtgtatgcttcactggaagaatactgcaaaatgcac
taccccgacgaaccaggcaggtttgccaaattactgcttcgattgccagcgctcagaagt
atagggctcaagtgtttggaacacttattcttcttcaaattaattggtgatactcccata
gacactttccttctagaaatgttggaaagtccatccccaagcagcacttga
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