Magallana angulata (Portugese oyster): 128157513
Help
Entry
128157513 CDS
T09348
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128157513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
canu02000
]
128157513
Transporters [BR:
canu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128157513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128157513
NCBI-ProteinID:
XP_052676057
LinkDB
All DBs
Position
7:complement(22454480..22482971)
Genome browser
AA seq
695 aa
AA seq
DB search
MRFRGMLVLYINYLHRSTYFRSLILSPLTLQDTVKCNMLESAKMEKGETDSSRSRSSDDS
IQMEKKQLKERDGWKGRLDFIMTCVGYAVGLGNIWRFPYLCYKSGGGAFFIPYVFFLVMC
GVPLFFMEASYGQFSSLSPISIWRICPLFKGVGVGMVMVSAIVCIYYNVIVAWTLYFLYM
SFRAVLPWSTCDNEWNTVNCVVDTGDRLPQPSPPTNATNSSSLFNSTYLVNGTLFNQTVF
GNMSAALSAAGNATAVLSGKKMSASEEFWTRHVLEITDGINNPGTIRWQLLIGLMLAWVF
VFLCLFKGVNVLGKVMHFAAPFPYLVLLVLLIRGVTLPGAVNGIKFYIFPKWEKLADYQV
WGDAALQIFYSVGMAWGGIITMASYNRFSNNVYRDAMLVPIINCATSIFAGFVIFAILGF
MAHSADTTVEKVVSQGPGLTFVAYPEAVAKLPISPMWAVLFFLMLFTIGLDSQFGMVETC
ISAFMDEYPHLLRTKRTLISFLACLFEFLMGLPCITQGGIYVLQIMDWYCASFSLMLISL
TECVAIAWIYGTDRFYKDIELMIGFRPSPIWHYMWKYITPSIILGIWLFSVITLGPVTYD
GKSYPTWALGFGWCLGVASMLPIPILAFKSMLSTEGTCSQRWKKLTTPLESWGPSQPEDR
EKYLTSLRKCKELEEISHSPHMRTNDDVATPFLST
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttagaggtatgttggtactctatataaattatctccatagaagtacttatttc
agatcacttattctttcaccactgacgctacaagacacagtaaagtgtaatatgttagag
tctgcaaagatggagaaaggagaaacagattcttcaagaagtcgttcgtctgatgattcc
attcaaatggagaaaaagcaactaaaagaaagagatggttggaagggccgcctggatttt
atcatgacttgtgtcggatacgccgtgggactggggaatatttggagatttccgtatctg
tgttacaaaagtggtgggggtgcgtttttcatcccttatgtgtttttcttggttatgtgc
ggagtacccttgtttttcatggaggcgtcgtatggccaattctccagtcttagccctatt
agtatatggaggatatgcccattattcaaaggtgttggggtgggtatggtaatggtatcg
gccattgtgtgtatctactacaacgtaatagtggcctggacgctgtatttcctgtatatg
tctttccgagcagtactgccatggagtacttgtgataatgaatggaacactgtgaactgt
gtggtggacactggggaccggctcccccaaccgtcaccacctactaacgccaccaatagt
tcctctctctttaacagtacctatctcgttaatggtaccctgttcaaccagacagtgttt
ggaaacatgtctgccgctctgtctgccgccggaaatgctacagcagttttgtcgggcaag
aaaatgtctgctagtgaagagttttggacacgacatgttttggaaatcacggacgggatc
aacaaccctggaaccattcgttggcagctgttgattggtttaatgttggcctgggtgttt
gtttttctgtgtttatttaaaggggtcaatgttcttggaaaggttatgcattttgccgca
cctttcccctatctagtcctgttggtactgctaattagaggggtaaccctgccaggagcc
gtcaacggcattaaattctacatcttccccaagtgggaaaagttggcggattaccaggtt
tggggagatgcagctcttcagattttctactcagtggggatggcttggggtggcatcatc
acgatggcaagctacaacagattcagcaataacgtgtacagggatgctatgctggtgccg
atcatcaactgcgcgactagtatttttgcagggttcgtgatattcgctattctgggtttc
atggcacactcggcagatacaacagtagaaaaagttgtcagtcaaggccctggtttgaca
tttgtggcttaccctgaagcagtggctaagctgcccatctcgcccatgtgggcagtgctg
tttttcctgatgttattcaccattggtttggacagccagttcggtatggttgaaacctgc
atttctgcatttatggacgaatatccacatctgttgagaactaagaggacgttgatatca
tttctggcttgtctctttgaattccttatgggtcttccttgcatcacccagggtgggatc
tacgtcctgcagattatggattggtactgtgcaagcttctcactgatgctcatctccctg
accgagtgcgtagccattgcatggatctatggcacggatcgattttacaaggatattgaa
ttgatgattggattcagacccagtcccatttggcactatatgtggaaatatattacaccg
tctataatcttgggaatttggttatttagtgtcatcacgttagggccagtcacatatgac
ggaaagagctacccaacatgggctctgggcttcggttggtgcctaggtgtggcatccatg
ctgcccatccctatccttgctttcaaatcaatgctttctacggagggcacctgtagtcag
agatggaagaaattgaccactcctttagaaagctgggggccgagtcaaccagaagataga
gagaagtacctaacgtccttgagaaagtgcaaagaacttgaggagatttctcattcacca
cacatgcgtacaaatgacgatgtcgctacaccctttctctcaacgtga
DBGET
integrated database retrieval system
