Magallana angulata (Portugese oyster): 128157756
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Entry
128157756 CDS
T09348
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128157756
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
90S particles
Other 90S particles
128157756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
ANAPC4_WD40
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WDR54
Gsf2
Motif
Other DBs
NCBI-GeneID:
128157756
NCBI-ProteinID:
XP_052676326
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All DBs
Position
8:25786112..25804588
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AA seq
468 aa
AA seq
DB search
MPFFIKSKRKQSKSKTKNQRPQVSLSGEPSKRKRKKLRLQNEEIESESEIESDEGERKAE
VVTSSDEEETAQEKKLRLAKEYLANLEQEEAEKREEDDIHRDIISHRLKQDLLEQSGKVQ
KLVADGYEQPSLDDIIVLRGHQLSVTCVVISPDKRHVFSGSKDCSIIKWDAVEGKRLHTI
PGGRKGTEDTHTGHTDHIFCLAMSSDGKFLASGGKNKFVLLWNPDTCQLIHRFNGHRGPI
SGLAFRIGSHQLFSASHDRSIKIWNVDELAYIETLFGHSDAITGIDSLFRDRAITSGGRD
ASIRIWKVVEESQLVFNGDPGSIDCIAFINESNFISGTDNNSISIWSLMKKKPLVTVKNA
HHGQDQNGNSSTQTNWITCVAALHNTDLVASAGSKDGCIKLWKISKNYTVLQPLYSIPMV
GFVNSLAFSPDRQVLVAGIGQEHKLGRWWRIKEAKNGIRIIKLKRKDV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccatttttcatcaaatcaaaaaggaagcaatcaaagtctaagacaaaaaatcagaga
ccacaggtgtcgctcagtggagaaccctcaaagcgtaaaaggaagaagcttaggctgcag
aatgaagaaatagagagtgaatcagagatagaaagtgatgaaggtgaaagaaaggctgaa
gtggtgacatcttcagacgaggaggaaactgcacaggaaaaaaagttgcgtcttgctaaa
gaatatttagccaacctagagcaagaagaggcagagaagagagaagaggatgacatccac
agagacattatatctcacagactaaagcaagacctgttggaacaaagtggaaaagtacag
aaacttgttgcagatgggtatgaacagccatccctggatgacatcatcgtcctgcggggg
catcagttgagtgtgacctgtgtggttatctcccctgacaaaagacacgttttcagtggc
tccaaagactgtagcatcatcaagtgggatgcggtggagggtaaaagactacacacgatt
cctggggggaggaaagggacggaggacactcatacaggacacacagaccacatcttctgt
ctcgcaatgtcctccgacggaaaatttctggcatcaggaggaaaaaataagtttgttctc
ttgtggaatccagacacctgtcagctcatccacagattcaatggccataggggccccatt
tctggcctggcttttagaattggctcccatcagttgtttagtgcttcacatgaccgatca
atcaaaatctggaatgtggatgagctggcttacatagaaacattatttggtcacagtgat
gcaatcacaggaatcgacagtctgttccgggacagggctatcacatcaggggggagggat
gccagtatccgaatctggaaagtcgtggaggagtcacagctagtgttcaatggagacccg
ggatccatagactgcatagccttcatcaatgagtctaattttatatcaggaactgacaac
aactccatatccatatggtcactcatgaagaagaagccgctagtgacagtgaagaacgct
caccatggtcaggatcagaacgggaactccagcacccagaccaactggataacctgtgtg
gcagctctccataacacagacctagtggcctcagcaggatcgaaagatggctgcatcaaa
ctatggaagatctccaagaattacacagtattgcagccactgtattcaatacctatggtt
ggttttgtgaacagcctggctttctcacctgatagacaggtgttggtggcaggaattggt
caggaacacaaactaggtcggtggtggcgaatcaaagaggccaaaaacgggataaggatc
atcaagttaaagagaaaagacgtctga
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