Magallana angulata (Portugese oyster): 128158790
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Entry
128158790 CDS
T09348
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128158790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128158790
03036 Chromosome and associated proteins [BR:
canu03036
]
128158790
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128158790
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
128158790
COMPASS/SET1 complex (yeast)
128158790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
WD40_Prp19
Roc
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Arf
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Gtr1_RagA
Beta-prop_SPT8
MMR_HSR1
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_NUP159_NUP214
GTP_EFTU
ATP_bind_1
Beta-prop_Nup120_160
SRPRB
Motif
Other DBs
NCBI-GeneID:
128158790
NCBI-ProteinID:
XP_052677706
LinkDB
All DBs
Position
8:32879723..32894840
Genome browser
AA seq
517 aa
AA seq
DB search
MKLTDNVVRNYRVAKIFRENTDRINRIDFSSDGNTLISSSDDDSIVIYDCQNGTPKKTLN
SKKYGVDLICYTHAVNTALHGSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLNMSPIND
SFLSGSLDKTIRLWDLRSQNCQGLMHLPGRPVAAFDPEGLIFAAGINSECVKLYDLRSFD
RGPFTTFKLTQDKDCDWTGMKFSPDGKLILISTNGQILRLIDAFQGTPLQTFMGFQNNKG
IPLEASFSPDSRFAFCGSTDGRIHCWNTETGVKVAVMNADHPGPIQCLQFNPKYMMLASA
CSNMTMTEILFKVIIIGDPTVGKTSFVQRYVNDAYRRDYKMTIGVDFALKVVKWSESQTI
KLQLWDIAGQERFTSMTRVYYKDAHACIIMFDLTQQSTFQNAVKWKKDLDTKCSLADGSP
IPCLLLANKCDLSHREVQQSDIEDMCKEHDFVGWTETSVKEGLMIEESMRFLCEEMMTKH
AELDGFSNSMARSMVPGSTIHLRSQQAEHKESSVCSC
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacagataatgttgttcgcaattatagggtagctaagatattcagagagaat
acagatcgcataaaccgaatagatttctcatctgatggcaacacgctcatctctagcagt
gacgacgattcgattgttatctatgattgtcaaaatggaacgccaaagaaaactttaaac
agtaaaaaatatggtgttgatttaatttgctacacacatgcagtcaacacagctttgcat
ggttccacaaaagttgatgatacaatacgatatctgtccctccatgacaacaaatacatc
agatattttccaggacacacaaagaaagttgtctccttgaacatgtcccctatcaacgat
tcatttctctctggatcgctggacaagacaatcagactttgggatctgaggtcacaaaac
tgtcagggcctgatgcatctccctggtcgcccagtggcagccttcgacccagagggcctc
atctttgctgcaggaataaactcagagtgtgtcaagctgtatgatcttcggtcatttgac
aggggtccgttcaccaccttcaagctgacgcaggacaaggattgtgattggacggggatg
aagttcagtccagatgggaaactgatcctcatttcgaccaacggacagattctacggctc
attgacgccttccaggggacaccactccaaacctttatgggctttcaaaacaacaaagga
atccccctcgaggcctcattcagtccagactcaagatttgcattctgtggatcgaccgat
ggacgaattcactgctggaatacagagactggggtcaaggttgctgtcatgaatgctgac
catcccggacccattcagtgtctgcagtttaatcccaagtacatgatgctggcctcagcc
tgctccaacatgaccatgacagaaatcctgttcaaggtcatcatcattggcgaccccacg
gtggggaagacctcctttgtacagcgctatgtcaatgacgcctaccggcgagactacaaa
atgaccattggggtggattttgccctgaaggttgttaaatggtctgaaagccaaactata
aagctacagctgtgggatattgcgggacaggaacgctttacctcaatgacgcgcgtctac
tacaaggacgcccacgcctgtatcatcatgtttgatctgacacaacagtctaccttccag
aatgccgtcaaatggaagaaggacctggacacgaagtgttctctggccgatggctcccct
ataccctgtcttctgctagccaataagtgtgacctaagtcatcgggaagtccaacaatca
gacatagaagacatgtgcaaggaacacgactttgtgggctggacggagacgtcggtcaaa
gagggactgatgatcgaggagtccatgagattcttgtgtgaggaaatgatgacgaaacat
gccgagctagatgggttttccaattccatggcacggtccatggttcccggaagtactatc
catctacggtcacagcaggcggagcataaagaatcctcagtctgttcatgttaa
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integrated database retrieval system
