Crassostrea angulata (Portugese oyster): 128159001
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Entry
128159001 CDS
T09348
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128159001
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Fib_alpha
DASH_Dam1
Motif
Other DBs
NCBI-GeneID:
128159001
NCBI-ProteinID:
XP_052677988
EnsemblRapid:
LOC128159001
LinkDB
All DBs
Position
8:44005423..44037438
Genome browser
AA seq
1762 aa
AA seq
DB search
MDSSLFYKLFVVIFMIRGSFSQRQPRCEQGSCYPATGDLLIGRENNLTASSTCGLTRPEN
YCIVSHLEEDTKCFTCDSRQPWSEYQRNSHRVNNIVSSFRERKLRWWQAENGKQFVSIQL
DLEAEFHFTHLIMRFRTFRPKALLIERSYDFGKTWKVYRYFAQRCEDSWPGVKRWPPRDL
KEVICDDRYSDEVPSTEGEVIFRVLPPFIRIENPYNEEVQDLLKLTNLRVNFTELHGLGD
TLLDNRQEIKDKYYYAMYDMTVRGSCSCYGHASRCEPVDGYNNRPDMVHGQCVCTHNTKG
RNCEQCQDFYNDLPWRPARQNASNACKKCNCNGHSDRCKFDPAVYEANGGISGGVCLDCQ
HNTMGRNCQQCTDMFYQDPYQDIRSSTICKPCDCDPSGSLLGGRCDDHSDERNGLVAGRC
HCKDHVEGKRCDTCKDGFYNLDESNQQGCEACDCSMIGTVTNSSCDKDSGMCLCKRYVTG
ERCDTCYHGFYGLSDIDTGCTPCDCDVGGSISEACDQTTGACTCKPNIIGKQCNEPRPGY
YYAMLDYLLYEAELAKGFGQARQYIQEPYADGYQPWTGPGYMLVREGDSLEFSIDNIEFP
TNYDIVIRYDLRMPEVWEDVKVTIRRDKIPDENGPCANHLPRDDDKSTTLNQGSRYVEVT
PSACLEPNTNYTIRLDFRRYKSGLSTPDATALIDSIVLVPATDSIPIFQVFGYLNFMKNE
FLRYRCREKQLTPYRPNYPEFCKKLTFSISTSMLHRALPCECDPTGSLNSECEPAGGQCL
CKPNVVGRKCDRCAPGTYNFGPAGCSACNCHEYGSRDNLCDAQTGQCLCIYNVGSRDCSQ
CEAGYWGFPQCRACDCNGNAETCDDLTGRCIACLNNTAGDHCESCDAGYYGDPRSYVRKP
CRPCMCPGGPTSLTQHADSCSEDPRQEVIICNCLPGYQGPNCDTCAENYFGNPLVANSTC
EPCLCNNNIDPNVDGSCDTSSGECLKCLFNTEGFSCEKCKPGYYGDATTQSCVAECVCDP
YGTDRSAGSCDRETGQCPCLPNVTGLRCDACLAGYWNITSGEGCSACGCDPEGSLGITCN
QFDGQCDCQQERGGRDCSQCEDLYWGNPKVQCTACDCNGQGSADMQCDRRTGQCVCLTGI
SGYKCDRCDRGTTGELPNCKPCGECFDNWDRVIRDLRDQTQYLVNEALKIKATGVEKAFE
KEFAEMENNIQEIRDIIRNANVSSNDIRDIEMNLKQLRESLNISYTDLERTKEEIDVRSN
SIRQGNNDIRALQMGVDKLKQKIENLKRNATNVQAQDVEGAFNLTKKAQEVSMAAQRKVD
ATDIILEQSETTRKEVNAMVESQHQEFDRKVAENSKNLKEVTDQINGLGDKITDINEMVC
DKRGEPCHSVCGGGGCGVCGGEQSCGDGAVKKAENALDLARQAEELLKIKERNATELLQK
LQNSQRGAEMGKDEAQMAYNEALKAKNQTEYARTALQDLFVRISGFLSADGATPNDIKSI
AEEVLAMSISLTPDQILDLAQKINITIQGLQNIDDILAETSSDLARAKGLKDRAETAEAD
AKSILEKAEDVQANLKGATDAQQAAQVAIAQADKDIGDAEQDLTQIESETAAATDKSNQS
LTSLGYLRARLQELKEKYIENEQRVDNAEMAAQEANKLALRAEEAANQLQNKYTTTAQDL
NSRYNLTTQAQSRAETLKRRADKLATDTTAKLKKLKDMQENFNANEKRLNKLSTDIDELN
RRMAEYLQAINDKATNYYNCKT
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagtttattctacaaactcttcgtagttatttttatgattagaggttctttc
tcccagaggcagccgagatgcgagcagggcagctgttaccccgcgaccggagatctcctg
atcgggagggagaataacctgaccgcctcctccacctgtggcctgacacggcccgagaac
tactgtatcgtcagtcacttggaggaggacaccaagtgtttcacctgcgactcgcggcag
ccctggtctgaataccagcgcaacagtcaccgcgtgaacaacatcgtgtcctcgttccgc
gagaggaagctgcggtggtggcaggccgaaaatggcaagcagtttgtgtccatccagcta
gatctggaggcggagtttcatttcactcacttgatcatgaggttcaggaccttccgacca
aaggccctcttgatcgagcggtcctatgattttggaaaaacgtggaaagtttatcgatat
tttgcccagcgctgtgaggactcgtggcccggggtcaagagatggccccccagggatctg
aaggaggtgatctgtgatgaccggtactcagatgaggtcccctccacagagggagaggtg
attttccgagtgctgcctccgtttataagaatcgagaatccgtacaatgaggaagtccag
gaccttctgaagctgaccaacctgagggtcaacttcacggaactccacgggctaggggac
acgctgctggacaaccgtcaggagatcaaggacaagtactactacgcgatgtacgacatg
acggtgcgcgggagctgtagctgttacggacatgcctcccggtgcgagccagtggacggc
tacaacaacagacctgacatggttcatggtcagtgtgtttgtacacacaacaccaaggga
cgtaactgtgagcagtgccaagacttctacaatgatctcccttggcgaccagcaaggcag
aatgcctctaatgcttgtaaaaagtgcaactgcaacggtcactctgacaggtgtaagttt
gacccggccgtgtacgaggcgaacggaggaatcagtggaggggtgtgtctggactgtcag
cacaacacgatggggcgcaactgtcagcagtgtacggacatgttctaccaagacccgtat
caggacatccgcagctcaaccatctgtaaaccttgtgactgtgacccatcgggttccctt
ttgggtgggcgctgtgatgatcactcggacgagagaaatggactggttgcagggagatgc
cactgtaaggaccacgtggagggcaagcgctgcgacacgtgtaaagatggcttctacaat
ctggatgagtctaatcagcaggggtgtgaagcctgtgactgcagtatgattgggacggtc
actaattcctcctgtgacaaggactcgggaatgtgtctgtgtaaacgatacgtcactgga
gagagatgtgacacctgttatcatggattttatggactgagtgacattgacactggttgt
acaccatgtgactgtgatgtgggtgggtcaatcagtgaggcgtgtgaccagacaacgggg
gcgtgtacttgtaaacccaacatcattggtaagcagtgtaacgagccccgcccaggatat
tactacgccatgctggattatctcctttatgaagctgaacttgccaaaggatttgggcaa
gctcgtcagtacatccaggagccctacgctgacggctaccagccctggacgggaccaggg
tacatgctggttagggagggggacagcctggagttcagtatcgacaacatcgagttcccc
accaactatgacatagtcatcagatatgatctaaggatgccagaagtgtgggaggatgtc
aaagttacaattcggcgggacaaaatcccagatgaaaacggaccatgtgccaaccatttg
ccacgagatgatgataaaagcaccacccttaaccaaggatcacgatatgtggaagttaca
ccatcagcctgtctcgaacccaacactaactacaccattcgtctggacttccgtcgctac
aagtcggggttatctacccctgatgccacggccttgattgactcgattgtccttgtgcca
gccacagatagtattccaatcttccaagtttttggttacttgaacttcatgaagaatgaa
tttcttcgctacagatgtcgtgagaaacaactgaccccgtaccgacccaattacccagaa
ttctgcaagaaactcacctttagcatctcaaccagcatgcttcaccgcgccctgccctgt
gaatgtgaccccaccgggtcattgaactcagagtgtgagcctgctgggggacagtgtctg
tgtaaacccaatgtggtgggcagaaagtgtgaccgctgtgccccagggacctacaacttt
gggcccgctgggtgttctgcttgtaactgccatgagtacggatctcgagacaacctttgt
gatgcccagactggtcagtgtctgtgtatctacaacgtgggatctcgtgactgtagtcag
tgtgaggccggatactggggattcccccagtgtcgggcatgcgactgtaacggaaatgca
gaaacctgtgatgacctgactgggaggtgtattgcatgccttaataacactgcaggagac
cactgtgagagttgtgatgctggttattatggtgacccaaggagttatgtcaggaagccc
tgtcgcccctgtatgtgccccgggggtcccaccagtctgacccagcatgctgactcctgt
tcagaggatcctagacaggaggtcattatctgcaactgtttgccaggatatcaaggacct
aactgtgacacatgtgcagaaaactactttgggaatcccttggtagccaacagtacatgt
gaaccctgcctttgtaacaataacattgaccccaatgtggatggtagctgtgacacatcc
tctggggagtgcctcaagtgtctgtttaacactgaagggttcagctgtgagaagtgtaag
cctggatactatggggacgcaaccacccagagctgtgtggcagagtgtgtatgtgacccc
tatggtacggacaggtcagctgggtcatgtgatagagagacagggcagtgcccatgtctc
ccgaatgtgaccggactaaggtgtgatgcctgtcttgccggctactggaacatcaccagt
ggggagggctgctccgcctgcgggtgtgaccctgaggggtctcttggaattacctgtaat
caatttgatggccagtgtgactgtcagcaggagaggggtggcagggactgcagtcagtgt
gaggacctgtactggggcaaccccaaagtccagtgtacagcctgtgactgtaatggccag
gggtcagctgacatgcagtgtgaccgccgaactggacagtgtgtgtgtctgactggaatc
agtggttacaagtgtgaccgctgtgacagaggcaccaccggagaactacccaactgtaaa
ccctgtggggagtgctttgataactgggacagagttattagggatctcagagatcaaacc
cagtatttggtcaatgaggctctgaagatcaaggctacaggagtagagaaggcatttgag
aaggagtttgctgaaatggagaacaacatccaggaaatccgagacatcattcgcaatgca
aatgtgtcctctaatgacatcagagacattgagatgaatctcaaacaactcagggaatct
ctgaatatcagctacacagatttagagaggacgaaggaggaaatagatgtaagatccaat
agtatcagacagggcaacaatgacatcagagccctacagatgggtgttgacaaactcaaa
cagaaaatagagaacctgaagagaaatgccaccaatgtccaggctcaggatgtggagggt
gcattcaacttgacaaagaaggcccaggaagtatcaatggcagctcagagaaaagtggat
gcaactgacataattttagagcagtcagagacaacgagaaaagaagtgaatgcaatggtg
gaaagtcagcaccaggagtttgatagaaaagtagctgagaacagtaaaaatctgaaggaa
gtcacggatcagattaatggcctcggagacaaaataacagacatcaatgaaatggtgtgt
gacaagcgtggagagccctgccactctgtgtgtggaggaggtggatgtggagtgtgtggt
ggagaacagagctgtggagacggagcggtaaaaaaagcagagaacgccctggacctggcc
cgccaggcagaggaactgctgaaaatcaaggagaggaatgcaacagaactcttacagaag
ctacagaactctcagagaggggcagagatgggcaaggatgaggctcagatggcttacaat
gaggcactcaaagctaagaaccagaccgagtacgctcgcacagccctccaggatctgttt
gtcaggatctcgggattcctgtcagcagatggtgccacccctaacgatatcaaatctatt
gcagaggaagtgctggctatgagcatatcgctgacccccgatcagattctagatcttgcc
cagaagataaacatcaccatacagggccttcagaacattgatgacattctggctgagaca
agcagtgatctcgctcgagccaaaggactcaaagaccgagcagaaacagccgaggcggat
gccaagtccattctagagaaggcagaggatgtacaggccaacctgaaaggggctactgac
gcccaacaagctgcccaagtggccattgcacaggccgataaagacatcggagacgcagaa
caggatctcactcagattgagtccgagacagctgcagccactgacaaatccaaccagtcc
ctgacatcactgggctacctgagggccaggctacaggagcttaaggagaaatacattgag
aacgaacagagagtggacaatgctgagatggcggcccaggaggccaacaaactggccctg
agggcagaagaggcggcaaaccaacttcaaaataaatataccaccacagctcaggatctc
aattcgagatacaatctcacaactcaggctcaatctcgtgctgagactctcaagaggaga
gctgataaattggcaaccgataccacagctaagctgaaaaagttgaaagatatgcaggaa
aacttcaatgcaaatgagaagagactgaataagctttccactgacattgatgaactcaat
cgacgaatggcagagtatttacaagccatcaacgacaaagctacaaattattacaactgt
aaaacataa
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integrated database retrieval system
