Magallana angulata (Portugese oyster): 128159176
Help
Entry
128159176 CDS
T09348
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03083
Polycomb repressive complex
canu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128159176
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128159176
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
canu01009
]
128159176
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
canu03036
]
128159176
03029 Mitochondrial biogenesis [BR:
canu03029
]
128159176
Protein phosphatases and associated proteins [BR:
canu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128159176
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
128159176
HMT complexes
COMPASS/SET1 complex
128159176
MLL-HCF complex
128159176
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128159176
Mitochondrial biogenesis [BR:
canu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128159176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
128159176
NCBI-ProteinID:
XP_052678197
LinkDB
All DBs
Position
8:39975023..39992358
Genome browser
AA seq
1550 aa
AA seq
DB search
MAAPILKWKRVTNTTGPCPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PAVRGDIPPGCAAYGFICDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKSCKNG
PPPCPRLGHSFTLLGNKAYLFGGLANDSEDPKNNIPRYLNDLYVLELKPHSNTLAWEFPP
TIGQPPPPRESHTCVGYAEKDGRRPRLIIYGGMSGCRLGDLWQLDIDTYTWIKPVVQGIP
PLPRSLHSANVIGHRMYVFGGWVPLVMDDVKVATHEKEWKCTNSLASLNIETMTWEPLAM
EVFEDSLPRARAGHCCVSIHTRLYIWSGRDGYRKAWNNQVCFKDLWFLETEKPPAPSRVQ
LVRASTNTLEVCWGAVPTADAYLLQLQKYDLPPSQALTPTAVPQGNPLMKAVSTPSTPQP
TVVRTPTAGVTQIRTNSGALGSATMTSPQTIRVTAVTARQKTPITVNPGTIRVASPQVVT
LPQQRPMSGNQMSGIQALAAAAAATQKITGTTTTPSTSAIKVVTPTIVTPTGVKVTPIGN
QVVKRQAIRLNWDRITDPLTKSTTANPSTTTVRVATPGATILKPTPGAIQQTIGGKQIIT
VHKASTGGSSSTGQPQIVTLVKTNQGMQVATTKGPLPQGATIVKLVTTQSGGTGKPTAII
TTSQPGQTPSTILGISSVQPQSSTTKTIIKTIPSSMLSMAKAGTSTATTPGGAKTIVIAA
PKGSTGGLTGTPHKIITSVPKIAGQGNTQFIVVSPQSSVGGAHTITSGGKPIQVTTLQTT
SGVSLAGHQIVTASHVGKPVVQQGGTIVKTIQATPTSLAGSATSLLINTTAGSSVTQSAP
TISLITQPSISQTPVTLTTQTVSATPIQATASGKPVQITITPAAAATVQSQPVVQVTPAV
TQPCTDGHNCPGDETPQPAVCTDGHNCPGDEVPLASNVCTDGHNCPGDENPQPAVCTDGH
NCPGDENPAQSNVCTDGHNCPGDENPQPSNVCTDGHNCPGDEVDGVPPTAKGQCTDGHNC
PGDENAQSQNVCTDGHNCPGDENPQPSGVCTDGHNCPGDENPKPSVCTDGHNCPGDENPQ
QSNVCTDGHNCPGDENPQPSNVCTDGHNCPGDENQTSSEANAAASSTTTVAPSVPLDTNA
AVSVSEQVPAILMQEAEPKQEPEEMEAAPTEAAPAPQEAPVATPQEAGVTPELSAPDSSS
TAAPGEVAPIVPKQEEPMDIGPTPVATLQGGVLSVGPPVVATPPQSVDTSVADSDPLATL
ASAAISSGSAQATIKQEPGLVAANGIKQEVQDKADTVPKTPTTPIKKEGNQWYDVGIIKG
TSCVVSHFYLSTDALQAGGNGNDIDVVNVGDVNVLKKQELLPGTAYKFRVAGINACGRGA
FSEISAFKTCLPGYPGAPSAIKISKVGGKSTEGAHLSWEPPQNTAGKITEYSVYLAVRNA
AAHVDQKPGAPAQLAFVRVYCGPAPTCTVTAASLASAHIDYTTKPAIIFRIAARNEKGYG
PATQVRWLQDAQSPAAQKVAVKRTVGGDGPQVVGAVQAKKLKTDDENEKP
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccattctgaagtggaagcgggttaccaatactacaggaccatgtccgcgg
ccaagacatggtcacagagcagttgctatcaaagatttgatggtcgtttttggtggtggg
aacgaaggaatcgttgatgaacttcatgtttacaacacagccaccaaccagtggtttgtg
ccagcagttcgtggggacattcccccagggtgtgcagcctatggcttcatctgcgatgga
actcgcatcttggtgttcggtgggatggtggagtatggcaaatattccaacgagttgtat
gaactacaggcaagccgatgggaatggaagagactaaaacctaaatcctgtaaaaatgga
ccacccccttgccctagactgggtcacagttttactttgcttggaaacaaagcatacttg
tttggaggcctggctaatgacagcgaagatccaaaaaataacataccaagatatctaaat
gacctatatgtactggagctgaagcctcattcaaacacactggcctgggagttccctccg
accatcggacaaccccctccccctcgggagtcgcacacatgtgtgggctatgcagaaaag
gatggaagaaggccccgcctcataatctacggaggaatgagtggctgtcgtcttggcgac
ctgtggcaactagatatagacacatacacatggatcaagccagttgtccagggtattccc
ccattacccagaagtctccactcggctaatgtcatcggccaccggatgtatgtgtttgga
ggctgggtgcccctggtcatggatgatgttaaagttgccactcacgagaaagagtggaaa
tgcacaaactcactggcttcactgaacatagaaacaatgacgtgggagcccctggccatg
gaagtgtttgaggactccctcccccgagctcgggccggtcactgttgcgtgtccattcac
actcggttgtacatctggagtgggagggatggatacaggaaggcgtggaacaaccaggtg
tgcttcaaggatttgtggtttctggaaactgagaagccccctgcaccctcccgtgtacag
ttggtacgggccagcactaacactctagaggtctgctggggggcagtgcccacagcggac
gcatacctcctacagcttcagaagtacgacctgcccccctcccaggccctcactcccacg
gcggtcccccaggggaaccccttgatgaaggcggtgtccactcccagcaccccacagccg
acggtggtcagaacgcccactgcaggagttacccagattcgaactaattctggggcccta
ggctccgctaccatgacttcgccacaaacaattcgagtgactgcagtgacagccagacag
aagacccccatcacggtcaaccccgggacgatccgagtcgcctccccacaggttgtcacc
ctgccccagcagcgacccatgagtggaaatcaaatgtcaggaatccaggccctggccgcc
gcagctgctgccacacagaaaatcacaggcaccaccaccaccccatccacctccgccatc
aaggtggtgacccctaccatagtgacccctacaggggtcaaggtcacacccatcggtaac
caagtagtcaaaaggcaggcgatccgcctgaattgggaccgaataacggacccattgacc
aaaagtaccactgctaacccctcgactaccacagtgcgagtggcgacccctggggccacc
attctaaagcccacccctggggccattcagcagaccatcggcggcaagcagatcatcaca
gtccacaaggccagtactgggggctcctcctccaccggtcagccacagattgtgacgctg
gtcaaaaccaaccagggcatgcaggtggccactacaaaaggtcctctgccacaaggagca
accattgtgaagcttgtcaccactcagtccggtggtaccggcaagcccaccgccatcatc
accacgagtcagccgggacagaccccctccaccatcctaggaatcagcagtgtacaacca
cagtcttctacaacaaaaaccatcatcaaaactattccatcgtccatgttatcaatggcc
aaggctggaaccagcactgctaccaccccagggggcgccaaaaccatcgtcatagcagca
cccaaaggcagcaccggcggactgacgggcaccccccacaaaatcatcacctcagtcccc
aaaatagcagggcaagggaacacccagttcattgtggtcagtccccagagcagcgtggga
ggggcacacaccatcacatcaggtgggaagcccatacaggtgactactctacagacaacc
tccggggtgtcactagcgggccaccagattgtcaccgcctcacatgtcggcaaaccagta
gtgcagcaaggaggaacgattgtgaagacgattcaggccacacccactagtctggctgga
tcagcaacctccctcctgattaacaccacagcggggtcatcagtgacccagtccgccccc
acgatctccctcatcacccagccctccatctcacagacacctgtcactctaaccactcaa
acggtctcagccacacccatccaggccacggctagtggaaaaccagtccagatcacaatc
actccagccgcggctgctactgtgcaatcccagcctgtcgtgcaagtcactcctgcggtg
acacaaccgtgcacggacgggcataattgccctggggatgagactccacaaccagcagtt
tgcacagacgggcacaactgcccaggggatgaggtccctctggccagtaatgtttgtaca
gatgggcacaattgcccgggagatgaaaatcctcagcctgctgtctgcacagatgggcat
aactgcccaggggatgaaaatccagcacaatcaaatgtttgcaccgatgggcacaattgc
ccaggagatgaaaacccacagccatcaaatgtgtgtacagatgggcataactgcccgggg
gatgaagttgatggagttcctcccacagctaaagggcagtgcacagatggacacaactgt
ccaggagatgagaatgctcagtcccaaaatgtctgcactgacgggcacaactgcccaggt
gatgaaaatccacagccttctggtgtctgcacagatgggcataactgtcctggcgatgaa
aacccaaagccttcagtttgcactgatgggcataattgcccgggagatgaaaatccacaa
caatccaatgtctgcacagatggacacaattgccctggagatgaaaaccctcagccatca
aatgtttgtactgatggtcacaattgtcctggagatgagaaccagacctcttctgaagct
aatgctgctgcttcttctacaaccacagtagcaccctctgttccactggacacaaatgct
gcagtgtccgtatcggaacaagttcctgcaatccttatgcaggaagccgagccaaaacag
gaaccagaggagatggaggcggccccgacggaagcagctccagctccacaggaagcaccg
gtggcgacaccacaggaggcaggagttacgccagagttgtctgctcctgactcctcctct
acagcagcacctggggaagtggcacccattgtacctaagcaagaggaacccatggacatt
ggccccaccccagtggctaccctccagggaggggtgttaagtgtgggacccccagtggta
gccacccctccccagtctgttgacacatctgtagcagactctgatcccctagccaccctg
gcttcagcagctatttcctcgggttctgctcaagccaccattaaacaggagcccggtctt
gtggcagccaacggaatcaaacaggaggtccaggacaaggcagacactgtgccaaagact
ccgaccacacccatcaaaaaggagggcaatcagtggtatgatgtggggatcattaagggc
acctcctgtgtggtgtcacacttctatctctccacagatgctctccaggccggcggcaat
ggaaatgacattgatgtggtcaacgttggggatgtgaatgttttaaagaaacaggagttg
ctcccgggcacagcctacaagttccgagtagctggcatcaatgcctgtgggcgaggtgcc
ttcagcgagatctcggccttcaaaacctgtctccccggttaccccggcgccccctccgcc
atcaagatcagcaaggtaggaggaaagagtacggaaggtgcccatctttcttgggaacct
cctcagaacacggcgggaaagatcaccgaatactccgtttatttggcggtccgtaatgcg
gctgcccacgtggaccagaagcctggggctccagcccagctggcatttgtgagggtatac
tgtggccccgcccccacgtgtacggtgacagctgccagtctggcctctgcccacattgac
tacaccaccaaaccagccattatctttaggattgctgcccgcaatgagaagggatacggt
cccgccacacaagtcaggtggcttcaagatgcccagagtccagctgctcagaaggtggca
gtgaagagaactgtaggaggagatggacctcaagtagttggagctgtccaggcaaagaaa
ctaaaaaccgatgatgaaaatgaaaaaccataa
DBGET
integrated database retrieval system
