Magallana angulata (Portugese oyster): 128162412
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Entry
128162412 CDS
T09348
Name
(RefSeq) integrin alpha-2-like isoform X1
KO
K06585
integrin alpha 9
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04512
ECM-receptor interaction
canu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128162412
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128162412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
canu04515
]
128162412
Cell adhesion molecules [BR:
canu04515
]
Integrins
Integrin alpha subunits
128162412
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_1
HisK_sensor
MFS_Mycoplasma
DUF6232
FG-GAP_2
Vpu
Motif
Other DBs
NCBI-GeneID:
128162412
NCBI-ProteinID:
XP_052681559
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Position
9:23337392..23380926
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AA seq
1237 aa
AA seq
DB search
MERQKICLLFLLLSYVSGFNIGLKGVAVSTGASDSMHGYSLDFATKDNKVWLLVGSPKAT
DPDVAQKTGTVSYCGTSLNCQHIAVTRLAGITGIPEDRTDMWLGASVDVGNAVAFCGPRW
RRNLSDDVTTMNGLCYEVPFGFLDGDGFLSPVIAPGFYNSPSNEQFTSPDAARFNQTIKY
GLSSSGMAVKYFGGDAMVGSPGLNEFAGGYAFLRGSGYQVKAEDTTEAKQGQMYGYALAI
GKFYGDSQTYFVSGGPRDGGSGKVLITDTSFVLKERLSGVEPGSYFGSVLCVVPASASGF
NTDILLVGAPFFSNMQTYANNYYTNEDQGRVYVYQKNGNDASLQVIQTLEGSKSKGARFG
FAMANLNDINKDGYNDVVIGAPFEDNDQGAVYVYMGYKRGFYLTQKFFASQVDFTPKVPI
KTFGSAFTQHPADFNADSHADLAVGAYESSSVFVFITNPPITMTVVTKTNLPNGGSQIIP
VNTTKFTINVCFDYDGENIPSDVVAVYDVTVDTAFLASSGSSQLRLCFNNSEGQCVSKVK
DSFKVFKAPPEPLCSGASLEVVVKDNWESMRGLFEPVVFDVEFKVNQSDNTQCIKGCPVV
NTFDPANENPFAKARKYSYELARAGCGSDNICQSDLSLTVSASNDIVTGSNANLDIDVTV
VTTGEPSYNTEIMFTFHPNMTYSSYVNTRGNMVSSVSCSPVNGTVKCSTEKQTFLQGEKI
KFKLTLDARRVAPLNESFELKVEVKTGSKDVNVANNVYTKSIDVLTKVINNFYMVATPEV
YITKPLEKDKPTIDVVHNVQMVNTGPSNLLEPLTFTFAYPQSQQVTPTKMVLNVSAATDE
TQISCTGLTLTPEGLTNSTFRAFSLSIDSSRNSRSANKFNCLSDGICSTATCSVGTFMYQ
SFISIDISYAVDANLYNVINDQESGNLKDVPIVTKFTLKPIDKSTVTIESNTDGISNCTC
SVMTRMLPSTPVEEEVPVWAYIVPIIIAIIILAVVIVILWKKGFFIRKYKVQMEEKKVES
GAKSTKDKEEFDDIEKANDIPEIVIEKESDKSPPMSTFSNTPPPSEKEQLKESIEDEYEN
SEFKTKGEPDWGGLDDLLHDLDVKAGRDLGSGPVVAPPKVKPTGMDYAEVDEEGNEESKL
LPNESAAPPVKAAAAPGGFDYDDIEDTDEATKLMPKEEDRDSPSKKTAEKDDIPDYAQVD
KSRKTSAKEPLLSSESSAADDIPDYAVVNKDKKKDDS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagagacagaaaatatgtctactgtttctattactttcctatgtgtctggatttaac
attggacttaaaggagttgctgtttcgacaggggcgagcgattccatgcatggatactct
ctggatttcgctaccaaggacaataaagtctggctcctggtggggtcaccaaaagcaact
gacccagatgttgcacaaaaaactgggacagtttcgtactgtggaaccagtttaaactgc
caacacattgctgtcactagacttgccggtataaccggaatcccggaggataggactgat
atgtggctgggagcctctgtagatgttggcaatgcagtagcattttgtggaccccgctgg
aggagaaacctttctgatgatgtcaccacaatgaatgggttgtgttatgaagtacccttt
ggatttctggatggtgatggattcttaagtcctgtcattgctccaggtttctacaactcg
ccgtccaatgaacagtttacaagtccagatgcagccagatttaaccagaccatcaagtat
gggttgtcttcgtcaggaatggctgtcaaatactttgggggagatgcaatggttggttca
cctggtctcaacgagtttgctggtggatacgcgtttttgagaggttcaggttatcaagta
aaagctgaggataccactgaagctaaacaaggacagatgtatggttatgctcttgcaatt
ggtaagttctatggagactcccaaacatactttgtatctggaggcccaagagacgggggt
tcaggaaaggtactaatcacggatacaagctttgtattgaaggagagactaagtggagtg
gagcctgggagttactttggctccgttctctgcgtggtaccggcttcagcgtccggcttt
aacactgacatcctcctggtaggagcccctttcttcagtaacatgcagacctacgccaat
aactactacaccaacgaggaccagggacgcgtgtacgtctaccaaaaaaacggaaacgat
gcgtccttacaggtgatacagacattagaagggtccaaatcaaaaggagcaaggtttggg
tttgccatggccaaccttaacgatatcaacaaagatggctacaatgatgtggtcatcggg
gccccctttgaggataatgaccagggagctgtgtacgtgtacatggggtacaagcggggg
ttttacctgacccagaaattttttgcctcacaagttgattttactcccaaagttcccatt
aaaacatttggcagtgcctttacccaacatcctgcagacttcaatgcagattcccatgca
gatttggctgtgggcgcgtacgagtcgtcaagtgtgtttgttttcattactaatccccct
atcaccatgactgtagttaccaagacaaacctacccaatggtggaagtcaaatcattcca
gtaaacacgacaaaatttacgattaacgtgtgcttcgattacgatggagaaaatattcca
tctgatgtagtggctgtgtatgatgtgactgtggatacagcctttctggcgagtagcggg
tccagtcagttacggctctgctttaacaactccgaaggacagtgtgtgagcaaagttaag
gactcgttcaaagtattcaaagcccctccagagcccctctgctcaggtgcctccctcgag
gtggttgtcaaggataattgggaaagcatgaggggcctgtttgagcctgtagtgtttgat
gtggagtttaaagtcaaccaatctgataatacacaatgcatcaagggttgtccagttgtc
aatacattcgacccagccaatgaaaatccatttgctaaggcacggaaatactcgtatgaa
ttggcaagggcgggatgtggctcggacaatatctgtcagtccgatctcagtctgacagtc
agtgctagtaacgatattgtcactggatcaaatgcgaatttagacatagacgtgactgtc
gttaccaccggtgaaccctcatacaacacggaaatcatgtttacgtttcatccaaacatg
acatattcctcatatgtcaatacccgtggcaacatggtgtcctctgtcagctgttcgcct
gttaacggaaccgtcaaatgctctacagagaaacagacgttcctacagggggagaagatc
aaattcaaattaacgctcgatgcgaggagagtggctccgttgaatgaaagtttcgaacta
aaagtagaggtcaagacgggcagtaaggacgtcaatgtagccaacaacgtctacacaaag
tccattgatgtgttgaccaaagtgataaacaatttctacatggttgccacaccagaggta
tacatcacaaagccattggagaaagataagcccacgatagatgtggtacacaatgtccag
atggtgaacactggacccagcaacctgctggaaccacttacctttacttttgcctatcca
cagagtcagcaagtcacaccgacaaaaatggttttgaatgtgtcagcagctacagatgag
acacagattagctgtactggtttgacattaactccagaaggcttgaccaactcaactttc
cgagcctttagtctctccatagactcaagtagaaattctcgcagtgcaaacaaatttaac
tgcctaagtgacggaatttgttcaacggctacttgttcagtaggaacattcatgtaccag
agtttcatatccatcgatatatcatacgctgtggatgccaatctgtacaatgtgatcaac
gaccaggaaagtggcaatttgaaggatgttcccatagtaaccaaattcacactgaaaccc
atcgacaagagcacagtcacaatagagtctaatacagatggaataagtaattgtacttgt
tccgtgatgacaaggatgttgcccagtacacctgtggaggaggaagtcccagtgtgggcc
tatattgttcctatcatcatagccatcatcattttagcagttgttatcgtcatcctgtgg
aagaaaggattctttataaggaaatacaaagtccagatggaggagaagaaggtagaatct
ggtgctaaaagcaccaaagacaaggaagaatttgatgatatagaaaaagccaatgacatt
ccagaaattgtaatagaaaaagagtccgacaaatcgccgccgatgtctacattttcaaat
acaccaccaccgtcagagaaagagcagctcaaggaaagcatagaggacgaatacgagaat
tccgaattcaagaccaaaggtgaaccagattggggtgggttagatgatctattgcatgat
ttggatgttaaggcggggcgggatttagggtcaggaccagtggttgctccccccaaggtc
aagcccaccggcatggattacgcagaagtagatgaagaaggcaacgaggaatctaaactg
ctacccaatgaaagcgcggctcctcctgttaaagccgctgccgcaccgggggggttcgat
tacgacgatatagaggatacagatgaggcaactaaattgatgcctaaagaagaagatcgg
gatagtcctagcaaaaagactgctgaaaaagatgatattccggactatgcccaagtagat
aaatctagaaaaacatcggccaaagaacctctattatcgtcggagtcgtcagcagcagac
gatatccctgactatgctgttgttaacaaagataagaaaaaggatgattcctga
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