Magallana angulata (Portugese oyster): 128162633
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Entry
128162633 CDS
T09348
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128162633
04121 Ubiquitin system [BR:
canu04121
]
128162633
Transcription factors [BR:
canu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128162633
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
128162633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
128162633
NCBI-ProteinID:
XP_052681832
LinkDB
All DBs
Position
9:complement(32655993..32675748)
Genome browser
AA seq
1347 aa
AA seq
DB search
MSYYYQTDPYQSYEEYDPQNGPYYPPPMHMPPPPFFQTPSPGQFYVPNMNSFPPQNYIQG
GEFVNSEIRPQSTGGNSYHENDEGKQNRPYSQQGSSKEYRTQSGRGQGYRRGQGHRGGHK
HGYDREQEKNYDRQFDHGHQRDAGYERSQRYEKGQGRGYGRGQGHGYKQGQGQRSEKGQR
TERYGSPVQDKDHRHTRDGDFGEKHRENYYKEGKSSKFEKGKDKTSDGTSEIFHKKLKDV
QRSRKSYESDGNFNVEKFDQNSHPTHKAEKAREISSNSQDTDSGVVERKSKAYSSDQDFF
EKNFASFSKKSTNKQDVTEIDHWRGERGTKGHNERPKSGHQGSKHNQHHTEDQRKGQNKK
GSKYDGSDQQKENTRNREEYQYGRDRADRKPNNPNKKDSRQGQRNSPRDHNAGKSESRKG
RDYRDEGITQSTAAGSRKEFVPKTKEREHKNSNGESTESFTNQICQAVVEWDRRTMSDTM
SETSDDICFSGETRSNASDVELPRRQDKDKSIHYKPMRKQNLLYQHQQQNQKGHSKKKQV
LLRTASGKVDESQRALLIEQLTAGTYECMVCCDTIRGQNAVWSCNGCYHIFHLRCIKTWA
KSPTARIEGVDNGWRCPACQNTSDKIPNQYRCFCGKCRDPEWNRMETPHSCGEVCKKNRS
ARCKHHCNILCHPGPCPPCNAVVTRQCLCGKQSQSMKCSSVEIFKCSSVCEKQLNCGKHF
CKEICHEGPCDPCTEVIKQECYGSHESREVTCGSSESFAESYSCGIKCDKTLGCGNHKCE
DTCHPGSCQSCTLLPEAITTCPCGARDLADLSPTPRQSCLEPIPTCGGKCRKPLKCGPSK
KPHICERKCHEGPCGSCDLTTELTCRCTKFKKEFPCTEVMKLKDRVFLCERKCNKLRSCQ
RHKCGQHCCVSEDHACNLICGKKLPCGLHRCEEPCHRGNCPPCLMASFDELPCHCGAEIM
YPPIPCGARPPECHQLCNRVHACDHDVQHRCHSDENCPPCTALTEKWCMGKHEKRKNIAC
HRDNISCGLPCNNELPCVQHKCTKVCHSGPCQAEGETCRQPCHKKRANCSHLCMTRCHAD
DPCPSIPCKAEVKIKCSCGNRESMVTCQSLDNKEFKSKTMQSIATSLGAGQSVDISHLTS
GKKAKKPNNVLECDAECALIERNRRLALALEIKNPDLGNKLGTPSFSDFLKDFAKKNLHF
VGGVEKNFNDLVQNAKKAKQAYRSHSFPCMNRDQRRLIHELAECYGCETQSYDYEPSKNV
VATAHKDKCWLPNVTLTSYIQRELHPKAPVPIPHRYNETTIRESALAAKHSCEVLKDKPI
ERVQRSNNTKETTPTSKVIDYFDFSTQ
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactactatcaaacagatccctatcaaagctatgaagaatatgatcctcaaaat
ggaccatattaccctcctccaatgcacatgcctcctcctccttttttccaaacaccctct
cctggtcaattttatgttcctaacatgaacagttttcctcctcaaaattacatccagggt
ggggagtttgttaattctgaaattagaccacagtcaaccggaggaaattcttatcatgaa
aatgatgaaggtaaacaaaataggccatactcccagcaaggtagttctaaagagtatcgc
acacagtccggcagaggtcaaggttataggagaggtcaaggacatagagggggtcataag
catggatatgacagagaacaagaaaaaaattatgataggcaatttgatcatggacatcaa
agagatgctggatatgagagaagtcaaaggtatgaaaaaggtcaaggtcgtggatatggt
agaggccaaggtcatggctataaacaaggacagggtcaaagaagtgaaaagggtcagagg
actgaaagatatggatcgccagttcaggataaagatcacagacacacaagagatggggac
tttggtgaaaaacatagggaaaattattataaagaagggaaatcaagtaagtttgaaaaa
ggaaaagacaagacaagtgatggtacaagcgaaatatttcataaaaaattaaaagatgtt
caaagatcgagaaagagttatgaaagtgatggtaattttaatgtggaaaaatttgatcag
aactcgcacccaactcacaaggcggagaaagcaagagagatatctagtaatagccaagat
acagacagtggggtggtagagagaaaaagtaaagcctatagttctgatcaagacttcttt
gaaaagaactttgcatcatttagtaaaaaatcgaccaataagcaagatgtgacagaaatt
gatcattggagaggcgaacgaggcactaaagggcacaacgagagacctaaaagtggccac
caggggtctaaacacaatcagcatcacacagaggatcaaagaaagggtcaaaataagaaa
gggagcaagtatgatggctctgatcaacaaaaagaaaatacacgtaacagagaggagtat
cagtatggccgagaccgtgcagacaggaaaccaaataatcccaataaaaaggatagtaga
caaggtcagagaaatagtcctagggatcacaatgcaggcaaaagtgaaagtagaaaaggg
cgtgactatcgtgacgaaggaattacacaaagcactgctgcaggaagtaggaaggaattt
gtccccaaaaccaaagagagggaacataaaaactctaatggcgagagtacagaatctttc
acaaatcagatctgtcaagcggtagtggaatgggatcggagaacgatgtctgataccatg
agcgagacgagcgacgacatctgtttttcgggcgagactagaagtaacgctagcgacgtg
gagttgccgaggagacaagataaggataagtctattcattacaaaccaatgaggaagcag
aacttgctatatcagcaccaacagcagaaccagaagggacacagcaagaagaaacaggtg
ctgctcagaacagcatcggggaaagtggacgagagccagagagctctactgatagaacag
ctgacagcgggtacgtacgagtgtatggtgtgctgtgacacgattcgcggacagaacgct
gtgtggagctgtaacggatgttatcacatcttccatcttcgctgtatcaagacgtgggcc
aagtcgcccacagctcgcattgaaggcgtggacaacggatggagatgccccgcatgtcaa
aacacgtccgacaagattcctaatcagtaccgctgtttttgtggaaaatgccgggaccct
gaatggaaccggatggaaacgcctcacagctgtggagaagtgtgcaagaaaaatcgttca
gcaagatgtaaacatcactgcaacattctttgtcatccgggtccctgcccaccctgcaat
gctgtggtcacccgccagtgtctgtgtggcaaacagagtcagtcgatgaagtgcagcagt
gtagaaatcttcaagtgttccagcgtgtgtgagaaacagctgaactgtggcaagcacttc
tgtaaggagatctgtcacgaaggcccctgtgacccctgtacagaggtcatcaaacaagag
tgctatggcagtcatgaatcaagggaggtaacatgtggcagcagcgagtccttcgccgag
tcctacagctgtggcatcaagtgtgacaagacactgggttgtggtaaccacaagtgtgaa
gacacctgtcaccccgggtcttgccagtcctgtacactcctcccagaggccatcaccacc
tgcccctgtggggcaagggacctggccgacctcagccccacccccaggcagtcctgtctt
gaacccatacccacatgtgggggaaaatgtcgcaagcctctgaagtgtgggccttcaaag
aagccgcacatttgtgagcgtaaatgtcacgaggggccctgtggatcatgtgacctaaca
acagagctgacctgtcgctgcacaaagttcaagaaagagttcccttgtaccgaggtcatg
aagttgaaagaccgggtgttcctgtgtgagagaaagtgtaacaaactgaggtcctgtcag
agacacaagtgtgggcagcactgctgtgtgtcagaagaccatgcctgtaatttgatttgt
gggaagaaacttccgtgtggtctacacaggtgtgaggagccttgtcaccgcggcaactgt
ccaccatgtctaatggctagttttgacgagctgccttgtcactgcggggctgagatcatg
tacccgcccattccctgcggggcgaggccgcccgagtgtcaccagctgtgtaaccgtgtt
cacgcctgtgatcacgatgtgcaacatcgatgtcacagtgatgagaattgtcccccttgc
acagctctgactgagaaatggtgtatgggaaaacatgagaaaaggaaaaacatcgcttgt
caccgagacaacatatcatgtggtttaccctgtaataacgagttaccttgcgtacaacac
aaatgtaccaaagtctgccatagcggtccctgtcaggccgagggggagacgtgtcgacag
ccgtgccacaagaagagggcaaattgcagtcacctgtgtatgacccgttgtcacgccgat
gatccgtgtccgtccatcccttgcaaagcagaggtgaagataaaatgtagctgtggaaac
agagaatccatggtaacctgtcaatcattggacaacaaagagttcaaaagtaagaccatg
cagtcaatagccacatccctgggggctggacagagtgtggatatatcacatctgacctcc
ggcaagaaggccaaaaagccgaacaatgtcctggagtgtgacgcagagtgtgctctcatt
gagaggaatcggcggttagctctggccctcgagatcaagaaccctgacctcgggaacaag
ctgggtacaccctcgttctcagattttctcaaggattttgccaaaaaaaatcttcatttt
gttggaggtgttgagaagaacttcaatgatttggtgcagaatgccaaaaaggcaaagcag
gcatatcggtcgcactcttttccgtgcatgaaccgtgaccagcggagactgatccacgag
ctggccgagtgttacggatgtgagactcagagttacgattatgaaccaagcaaaaacgtg
gtggccacagctcacaaggataaatgctggctacctaatgtgaccttgacctcgtacatc
cagagagaacttcaccccaaggccccggtcccaatcccccacagatacaatgagacaaca
atcagagaatctgctttagctgcaaaacatagctgcgaggtgctgaaggacaaaccgata
gaacgggttcagaggtcaaataacaccaaggagacgaccccgacctctaaagtgattgat
tactttgacttttccacccagtga
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