Magallana angulata (Portugese oyster): 128162774
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Entry
128162774 CDS
T09348
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23-like
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128162774
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
canu04031
]
128162774
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128162774
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128162774
GTP-binding proteins [BR:
canu04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
128162774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
G-alpha
SRPRB
Gtr1_RagA
zf-RING_UBOX
MMR_HSR1
zf-B_box
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
128162774
NCBI-ProteinID:
XP_052682111
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Position
9:complement(30775978..30784147)
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AA seq
576 aa
AA seq
DB search
MACGTSPNIGFYMNAGRSSDDYTDNTILECRVCNEVFRFQGDKVPGLLVCGHTVCHQCLT
RIPLHGTMLNCPFDRQPTQIGDSGVWGLKKNFALLELLEKLQYPVPGHTSKTSFTEESLA
KERQFGIPCDENELHTAIVFCIVCCTHLCVECSEQTHSTRTLTKHKRVPISEKPRENPKC
SFHPMHLVEFACLEEECKNSPLMCYICKDYGRHVKHRHTLLETEAENVRRSITSAVLHIR
SFGEEVAESARKLGQTIQQIEGGAQVVQSDEGSNAVQGVQGTAELARGKIKAHFDELRTT
LNRQEVIALTTVDAHIREKLCMLRQQQEDMATLLSQVSAVCHQCEGTLQQDDTKVLMAKH
DVQMMLETTQKQQQQFSDIPDQLPLDPNIPITFTKDNRVHIGPKIEMRVVILGLDEAGKT
SILFKLKENEFITTIPTIGFNVETVEYKNVKFTIWDVGGQQKIRPLWKHYFFNTQAVIFV
VDSSNRDRLAESCNELAKLVQEKELKEASLLIFANKQDVDNCISIESITENFGLFKLCCN
RSWHIQACDVKSGLGLQDGIEWLSRQMVAAGASEFA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtggaacgtcgccaaatattgggttttatatgaatgcaggaagatcgagcgat
gattatacagataatacaatcttggaatgtagagtttgcaatgaagtctttcgtttccaa
ggcgacaaggtccccggactgttggtctgtggtcacacagtttgccaccagtgtctgacg
cgcattcccctccatggcaccatgctcaactgtccatttgaccgacaaccaacacagatt
ggagactcgggagtctgggggctgaagaaaaacttcgctctccttgaacttttggagaaa
ctccagtacccagtgccaggtcatacaagcaagacaagctttacagaggagagtttggct
aaagaaagacagtttggtattccctgtgatgagaatgaactccataccgccattgttttc
tgcattgtctgttgcacccacttgtgtgtggagtgctcggagcaaactcactcaacaaga
acactcaccaaacacaagcgagtaccaatctcggaaaagcccagggagaacccaaagtgc
tccttccatccgatgcatctggtcgagtttgcctgtcttgaggaggagtgtaagaattca
cctctgatgtgttacatctgtaaagactacgggaggcatgtcaaacacaggcacaccctt
ctagagacagaagcagaaaatgtcagacgatccatcaccagtgctgtccttcacattcgt
tcattcggcgaagaagttgctgagtcagcaaggaaactgggtcagaccattcagcagatc
gaagggggagcacaggttgttcagagtgatgaagggtccaatgcagttcaaggggttcag
ggaacagcagaacttgcccgtggaaaaatcaaggctcatttcgacgagctacgcacaaca
ctgaatcgacaggaagttattgccttgacgacggtggatgctcacatccgagagaagttg
tgtatgctgaggcaacaacaggaggacatggcgacgcttctgtcacaggtgtcagctgtg
tgtcatcagtgcgagggaacgcttcagcaggatgacacaaaagttctgatggcgaagcat
gatgtccagatgatgctggagacgacccagaaacagcagcagcagttctctgacataccc
gaccagcttcctctagatcccaacatccccatcacctttaccaaggacaacagagtacac
attggaccaaaaatcgagatgcgagtggttatcttaggattggacgaagcaggaaaaacc
agtattttattcaagttgaaggagaatgagtttatcacaaccatacctaccataggcttc
aatgtggaaacggtagaatacaagaatgtcaagttcaccatctgggacgtcggcggacag
cagaaaatccgaccactgtggaaacactactttttcaatactcaagctgttatatttgtg
gtggacagcagtaacagggaccgtcttgctgagtcttgtaatgagcttgccaaactcgtc
caggagaaggagctcaaggaagcctcgctgctcatctttgccaacaaacaggatgtagac
aactgtatcagcatagagtcaatcacggagaacttcggtctgttcaagttgtgctgtaac
aggagctggcacatccaggcgtgtgatgtcaagagtgggcttgggcttcaggacggcatc
gagtggttgtcgcggcagatggtggcagcaggggcctcagagttcgcatga
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