Crassostrea angulata (Portugese oyster): 128162853
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Entry
128162853 CDS
T09348
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128162853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128162853
03036 Chromosome and associated proteins [BR:
canu03036
]
128162853
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128162853
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128162853
PBAF complex
128162853
GBAF(ncBAF) complex
128162853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
128162853
NCBI-ProteinID:
XP_052682224
EnsemblRapid:
LOC128162853
LinkDB
All DBs
Position
9:7640735..7660020
Genome browser
AA seq
523 aa
AA seq
DB search
MMQQPHGQHRFPQPGPQVRPYQQPGYPGGPPRPGGYGPGPQMGPGGPRMMSHGGMPPHPY
AGGSPSSKSARSEKSKESSARDKTKDMGSMRPGMSPGMHPPPHGMQTPHGMDRKRPPDPR
GTPQQMKQAKKKKKVADKILPQRVRDLVPESQAYMDLLAFERKLDATIMRKRLDIQEALK
RPMKQKRKLRIFISNTFYPAKSEGEDGDETVASWELRVEGRLLEDAASAKLNDSSKMKRK
FSSFFKSLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDQNVKCTVLLMLDYQP
PQFKLDSRLARILGVHTQTRSVIINALWQYIKTHRLQDHHEREYINCDKYLEQIFECKRM
KFAEIPGKLHGLLMPPDPIVINHVITVEGPDARKTACYDIDVEVDDTLKQQMNSFLLSTA
SQHEIGSLDSKIHETVETINQLKTNREFFLSFAKNPQEFINNWLISQSRDLKTMTDVVGN
PEEERRADYYYQPWSQEAVCRYFYSKVQQRRMELEQALGIRNS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaaccacatggtcagcataggtttccacaacctggaccacaagttaggccc
taccagcagccgggatatcctgggggacctccaagaccaggtggctatggcccagggcct
cagatggggccagggggacctcgaatgatgagccatgggggcatgcctccacatccatat
gcaggaggatctccgagttctaagagtgctcggtctgaaaagtccaaggagagctcggct
cgtgataaaaccaaagatatgggctccatgcggccaggaatgtcaccaggaatgcaccct
cctccccatggaatgcagaccccccacgggatggacaggaagagacctcctgaccccagg
ggcaccccccagcagatgaaacaggcgaaaaagaagaagaaagttgctgacaaaattcta
cctcaaagggtgcgtgacctggtgccagagtcgcaggcttacatggatctgttggccttt
gagaggaagctggacgccactattatgagaaagcggcttgacatacaggaggcgctcaaa
agacccatgaagcaaaagagaaaattaagaatcttcatttccaacacattttacccggca
aaatcagaaggagaggatggggatgaaactgttgcatcatgggaactaagagtagaaggg
agactactggaggatgcagccagtgctaagctgaacgactccagcaaaatgaagcggaag
ttctcctccttcttcaagagtctggtaatagaactggacaaggaactctatggaccggat
aatcatcttgtggagtggcataggactccaacaacccaagagactgatgggttccaagtc
aaacgcccaggggaccagaatgtcaagtgcacagtccttctgatgcttgactatcagccc
cctcagtttaagttggactctcggttggcccgcattcttggtgttcacacccagactcgc
tcggtcatcatcaacgctctgtggcagtacatcaaaactcaccgcctccaggaccatcac
gagcgcgagtacatcaactgtgacaaatacctagaacagatttttgagtgcaaaagaatg
aagtttgctgagattccagggaaacttcacggtttgttgatgcccccggaccccatcgtc
atcaaccacgtcattactgtggagggaccagatgccaggaagacggcctgttatgacatt
gatgtagaagtggatgacacactaaaacaacagatgaattctttcctcctgtcaacagcc
agccaacatgaaatcgggtcactggactccaagatccatgaaaccgtggagacgatcaat
cagctgaaaaccaacagagagttctttttgagctttgccaagaatcctcaggagttcatc
aacaactggttgatttcgcagtcaagggacctcaagacaatgaccgacgtagtgggtaac
cccgaggaggagaggcgggccgactactactaccagccctggtcccaggaggcagtgtgt
cgctacttttacagcaaggtccaacagaggagaatggaactggagcaggctctaggaata
cgcaattcttga
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