Magallana angulata (Portugese oyster): 128163069
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Entry
128163069 CDS
T09348
Name
(RefSeq) integrin alpha-4-like isoform X1
KO
K06483
integrin alpha 4
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04512
ECM-receptor interaction
canu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128163069
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128163069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128163069
04515 Cell adhesion molecules [BR:
canu04515
]
128163069
04090 CD molecules [BR:
canu04090
]
128163069
Exosome [BR:
canu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128163069
Exosomal proteins of other cancer cells
128163069
Cell adhesion molecules [BR:
canu04515
]
Integrins
Integrin alpha subunits
128163069
CD molecules [BR:
canu04090
]
Proteins
128163069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
FG-GAP_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_2
Integrin_A_Ig_3
DAM-like-phage1
Motif
Other DBs
NCBI-GeneID:
128163069
NCBI-ProteinID:
XP_052682492
LinkDB
All DBs
Position
9:complement(12849928..12881220)
Genome browser
AA seq
1080 aa
AA seq
DB search
MRKQRALFSGVLSPNLPSGICVLWMIILVLSEFCLSFNIDVSRPLVFQGTADTNFGAALD
LLNNSDGKWVVIGAPLDTLSNAEGYSKTGNIYLCPIRLDKNRSDVTECSELNLPDVGKIV
SDDSMFGSSVMVLEETTVVCAPGYKNAFKTNYTSGACVYFKNENPSDISSFLIRIPASDT
YSFSMSMFGFSTTAGIVRLCFYLRTKRFLIRLVDQTADGKLNHMVTMNNAYFVAGGLATF
SITPRGLLSRSVPGTDSSQPGAYFGYSLATGVFDRDKSYYVAGRPGFANNGGNIGNVEIL
EFFENGIKTTKKLIAGFQLGGGFGHSVCVADVNGDSYDDVLIGAPLEYINESNRNIVIDS
GAVYIYLGTGTPDILKETPVVIRGTKKQWARFGTAIVNLKDISNDDIADIAVGAPFEDDH
RGAVYIYNGRSGNFDKPWTFSQRITSNDISLGISALGYYLSKSQVDIDDNLYGDLAVSGF
KTDQVVVLRTRPVAHVTADILTTPGYIPINSTGLECNLGSDIPCVTLNIRFFVSGKGLEK
GVYLNYSLYSDVFSESERFLLRPNDSLVNSLNRSLESQLILLKPNEQTFVNVSLTLGTID
WRFFKSLEDPVTVKLTFALTDLSIGDEVVPMLHTDVITTHTKTLEINRNCSSDPCKPAYV
ALLQSAEKNLTLQQNQELSVQMALFNTGDPVEKTEFFVETFPRMDFSRIIEGFSDLQCNE
ISMGYLHCEMRPVRFYAHQKYSFVLNFFIDPNAVVAKNSDHVKVEVLFNSTEANTDTPKF
VMISHFNLRSNVRVVGGSDFSELILASSSEGIFKYSVSFDVHNDGPSPLGANLKIPIASG
HLKSDIVKGIAVTKGKCSGFLDLEKKSLNDPENIQSESLTDDEATEEGPVEIKCGLPVIS
CTYLTCNLGYVKTTEFESVEFTMDLDASVLSAILKGQSAESGFFVIPGDVQQYDNNIPAF
INVTESAKVALRVSVGSTGQQSTDILWYTIGGSAGGFLIFIIIALILWKCGFFNRKRRGE
IDRAKRQSMMKQRQSNMMSSFVNKELNKHSSSPLNGDNKDSKLFRLSAKKDYPDLEIQDR
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacagagagctttgttttccggtgtgttatcgccgaacttacccagcgggata
tgtgttttatggatgataatacttgtgttaagtgagttctgcctgagtttcaacattgat
gtttcgcgacccctagtatttcagggcactgctgatacaaacttcggggcagcattagac
ctattgaataactcagatgggaaatgggtggtgatcggtgcccctctggacacgttgtca
aatgcagagggttactcaaagacagggaacatttacctgtgtccaatacggctcgacaag
aaccggtctgacgtcacagaatgttcggagttgaatctcccggatgttggtaaaatagtg
tccgatgattccatgtttggctcaagtgtgatggtgctagaagaaacaacagtcgtttgc
gcacctggatataaaaacgcgtttaaaaccaactatacttccggcgcatgcgtgtacttt
aaaaacgagaacccttcagatatttccagtttcctgatccggatcccagcaagtgataca
tattccttttctatgtctatgttcggattttccaccacagctggaattgtacgtttgtgt
ttttatttaagaacaaaacgtttccttatacgattggtggaccaaacagcggatggcaag
ctcaatcatatggtaacaatgaataatgcctactttgtagctggaggtctagcaacgttt
tctatcacaccacgaggactgctgagtcgaagtgtgccgggaacagattctagccaacca
ggagcctattttggctactccttagctactggggtgtttgacagggataaatcctactat
gtagcaggccgacccggctttgcaaacaatggcggaaatattggaaatgttgagattctt
gaattttttgaaaatggcatcaagacaaccaaaaagcttatagcaggttttcagcttggt
ggaggatttggacactctgtatgcgtggcggacgtgaatggagacagctatgacgatgtt
ttgattggtgcgccgcttgagtatattaacgaatcaaatagaaacattgtgatagacagc
ggggcagtttatatatatcttggcacagggacgcccgatattttaaaggaaactccggtc
gttattcgaggaactaaaaagcaatgggcaagatttggaacggcgattgttaaccttaaa
gatatttcaaacgatgacattgcagatattgcagtaggagccccatttgaagatgaccac
agaggggccgtgtacatatataacggccgctcgggaaactttgacaaaccgtggacgttt
tcccagagaattacttcaaatgacataagcctcgggatcagtgccctggggtactacctt
tctaaatcccaagtagatatcgatgacaatttatatggagatttggcggtttcgggtttt
aagacggaccaggtggtggttcttcggacacgccccgtggcccacgtaaccgccgacatc
ctgacaactccgggatacattccaatcaactcaacaggactcgaatgcaatcttggatcg
gacattccctgtgttactttgaacatccgtttttttgtgtctggaaagggattagagaaa
ggagtttatttaaactacagtttatacagtgatgttttctccgagagcgagcgatttctc
ctgcgaccaaacgacagcctcgttaacagtctgaacagatcgctggagtcgcagcttata
ctgcttaagccaaacgaacagacatttgtcaatgtttcgttgactttaggcacgatagac
tggagatttttcaagagcttagaagacccggttacagtgaagttaacgtttgccttaacg
gatttatccattggagatgaagtagtccccatgctgcatacagatgtcatcacaacacac
acaaaaacacttgaaatcaatcgaaactgttcctcagatccttgcaaaccggcatacgtt
gccttacttcaatcagcagagaagaacctgacgttacagcaaaaccaagaattatcagtt
cagatggcgttgtttaacacgggtgatccggtcgagaaaactgaattcttcgtagaaaca
ttcccgagaatggatttctccaggatcatcgaagggttcagtgaccttcagtgcaacgag
atttctatgggatacctgcattgtgagatgcgtccggtccggttttatgctcaccaaaaa
tactcgtttgtgttgaatttctttatcgaccctaatgctgtggtggcgaaaaattcagac
cacgtgaaagttgaagtcctgtttaattcaaccgaagctaacacagacacgccaaagttt
gtgatgattagtcattttaaccttcgttccaatgttagagttgtcggaggatctgatttc
tcggagcttatcttagcatcgagctccgaaggtatcttcaaatattcagtttcgtttgat
gtccacaatgacggacctagtccactcggtgcaaacttaaaaataccgatcgcaagcggc
cacttaaagtcagacattgtgaagggaatagcagttacgaaaggaaagtgttccgggttt
cttgacttggagaaaaagagtttgaatgatcctgaaaacatacaatctgagtcgttaacg
gatgatgaagccacggaagaagggcctgttgaaattaagtgtggtcttcccgtcattagc
tgcacctatttgacgtgtaatcttggttatgtcaagacaacggaattcgaaagtgtggaa
tttacaatggatctcgatgccagcgttctctctgccattcttaaaggccaaagtgctgaa
tcagggtttttcgtcatccctggtgatgttcagcaatatgacaacaatattccagcattc
atcaacgtcacagagtcagccaaagtagcgctgcgggtgtctgttggttccacaggacaa
caatcaacagacattttatggtacacaatagggggtagtgcaggagggttcttgatcttc
ataattattgcacttatcctatggaagtgtgggtttttcaatcggaagaggagaggagaa
attgaccgagctaaaagacagtcaatgatgaagcagagacagagtaatatgatgtctagc
tttgtgaataaagaactcaataaacattcatcctcgccattaaacggggacaacaaggac
tcgaagctatttagactaagtgccaaaaaggactatccagatttagagattcaagataga
tag
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integrated database retrieval system
