Magallana angulata (Portugese oyster): 128163192 Help Entry 128163192         CDS       T09348                                  Name (RefSeq) THO complex subunit 3-like   KO K12880   THO complex subunit 3 Organism canu  Magallana angulata (Portugese oyster) Pathway canu03013   Nucleocytoplasmic transport canu03040   Spliceosome Brite KEGG Orthology (KO) [BR:canu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     128163192   09122 Translation    03013 Nucleocytoplasmic transport     128163192  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:canu03019]     128163192    03041 Spliceosome [BR:canu03041]     128163192 Messenger RNA biogenesis [BR:canu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      128163192 Spliceosome [BR:canu03041]  Complex C   Other components    EJC/TREX     128163192  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     128163192 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_EML NBCH_WD40 Beta-prop_NOL10_N RMC1_N Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_IFT140_1st CFAP251_N TRM82_WD WDR90_beta-prop_4th ASA1 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_TEP1_C Beta-prop_SPT8 PAC11 Cytochrom_D1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_RIG_1st PEP5_VPS11_N Tricorn_2nd Beta-prop_WDR75_2nd WD_LRWD1 B-prop_COPA_B_2nd DNAI3_WD Motif Other DBs NCBI-GeneID:  128163192 NCBI-ProteinID:  XP_052682680 LinkDB All DBs Position 9 Genome browser AA seq 291 aa AA seqDB search MKRGFKSHHQHTNQNKRIREHTAHDSKVHSVALSYDGRRLASGSFDETVSVFQLDNDRDR MVKDCTFRGHSDSVDQLCWHPKNPDQLVTASGDKTIRIWDARTNRSVATVNTKGKTAMKI INICWSPDGRTTAVCNKDDLITFIDVRSHRSNAEEQFKFEVNEISWNNDWDLFFLTSGQG SIDLLSYPDLKLQHTLNAHPASCICIEFDPKGKYFATGSADALVSIWDVAELACSRTFST LEWPVRTQSFSHDGKMLASASEDLIIDIAEVDSDLPSAKDYPQTLYRFTAH NT seq 876 nt NT seq  +upstreamnt  +downstreamnt atgaagagagggttcaaatcccatcatcagcatacaaatcaaaacaagagaatacgagag cacacggcgcacgactccaaagttcactccgtggcgttgagctatgacggacggcgcctg gcctcggggtcctttgacgaaactgttagcgttttccagctagacaatgacagagaccga atggtcaaagattgcacatttcgtggacatagtgacagtgttgaccagctgtgttggcat ccaaagaatccggatcagttggtgacagctagtggagacaagacaatacgaatctgggac gcccggaccaatcgttctgtggccactgtcaatactaaaggtaaaacagcgatgaaaatc ataaacatctgctggtcaccagatggaagaactacagctgtgtgcaacaaggatgaccta attacttttattgatgtcagaagtcacaggtcaaatgccgaggaacagtttaagtttgag gtcaatgagatctcctggaacaatgactgggacctgttcttcttgacgagtgggcaaggc agcatagacttactgagctacccagatttaaaactccagcacaccctgaatgctcaccct gctagctgcatctgtatcgagtttgaccccaagggaaagtactttgccaccggtagtgca gacgccttggtcagtatttgggatgtagcagagctagcatgtagtaggaccttctcaacg ttagagtggccagtcagaacccagagcttcagccatgacggtaaaatgttggcctcagca tcagaagatctgattatagacatagcagaggtcgactcagatctcccctctgccaaggat tatccccagaccctctacaggttcactgcacactga

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