Magallana angulata (Portugese oyster): 128163233
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Entry
128163233 CDS
T09348
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128163233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128163233
04121 Ubiquitin system [BR:
canu04121
]
128163233
03036 Chromosome and associated proteins [BR:
canu03036
]
128163233
03400 DNA repair and recombination proteins [BR:
canu03400
]
128163233
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
128163233
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128163233
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128163233
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128163233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
BRCT
Ank_3
BRCT_2
zf-RING_6
Ank_KRIT1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128163233
NCBI-ProteinID:
XP_052682736
LinkDB
All DBs
Position
9:complement(22108011..22128862)
Genome browser
AA seq
652 aa
AA seq
DB search
MNIQLFHQRLGELEKHLHCSVCNCIPDMPWVLGDCEHLYCRQCCDNLLGQCCVICGIPVH
VKDARMHRLVSNIVEQFKIMNRILQENFLVQESGIAKAGETTNCDFHTDHSNSSNNTSTN
ISSEFQYNLNDAAGSPELFGPDSPIKLSNHTDSPAKREQLEEASNLHARHVPETGEELAI
NLLFTGDNSSLSGNCQGTESKPVNKSNENIIQNCRTAARKINGAKQNIQFITRKKTIKRS
LKRSLGKENTHMSSPSSRKCSSTTPFQLGSPSHLNLSFNNVWQGSPHNIDKKNAKGETSL
QVACIKGDLQRVERLLSSGANPNTRDHAGWTPLHEACQHGHAEIAARLLSAGALVDVPGT
ENETPLHDAVRHLKTDCVTLLVRHGASINTRNINGLSPLDLAGGHSDLMEVLHTEVQGVI
TPLTLQVDPLVYQSPCFLGTGLSREQRSTLQRCASKLQARVVEGFCPEVTHVVSGCNNEG
LCPRTIKYLQGVLSGRWIVNMEWVEMSLEYGSKLVEEAFEIPGTSTDPQSGAAQKGRINR
QKQLPGLFDGCQFYFYGHFEYPTPDREDLVSLVKLGGGQVIQREPKPGHIPETQLTTPYH
APAGSETCCIYIVHDNRATFQPITTSALCTVRAAWIMDCISQFRLINVGSDC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacaacttttccatcagagactgggggaattagaaaaacatttacattgcagt
gtgtgtaactgtataccagatatgccatgggtgctgggagactgtgaacacctttactgc
agacaatgctgtgataacctgctgggtcagtgctgtgttatttgtgggatacctgtacac
gtgaaggatgctcgtatgcacagactggtgtccaatattgtggaacagttcaaaataatg
aatcgcatcctccaagagaacttcttggtccaggaatcaggaatcgccaaggcaggagag
acgactaattgtgactttcatacagatcactcaaattcaagcaacaacacaagtacaaac
atttccagtgaatttcaatataatctgaatgatgctgcaggcagtccagaacttttcggt
ccagacagtcccatcaaactgtccaaccatacagattcccctgccaagagagaacaactt
gaagaagcaagcaatctacatgcaagacatgttccagaaactggtgaggaactggccatc
aaccttttattcactggagacaattcttccttatctggcaattgtcaagggacagagtca
aaacctgtaaacaaaagcaatgagaatattatacagaactgtaggacagcagctagaaaa
atcaatggggccaagcaaaatatccagtttatcaccagaaagaaaacaatcaaaagaagt
ttaaaaaggagtcttgggaaagagaatactcacatgtcatctccatcttccagaaagtgc
tcaagcaccaccccttttcaactaggtagtcctagtcatttgaacttgtctttcaataat
gtttggcaaggaagccctcacaacattgacaagaaaaatgccaagggggaaacaagtctt
caagtggcatgtataaagggggatttgcagcgagtggaaagactgctatcttctggagca
aatccaaacactcgagaccacgcaggatggacacctctgcatgaagcttgtcaacatggc
catgcagagatagctgcgagacttttaagtgctggagcattggtagacgttccaggtaca
gagaatgagactccactacatgacgctgtccgacatctgaagacagactgtgtgactctg
ctggtcagacacggagcatctataaacacaagaaatattaacggcctctccccgttagac
ctggctggtggtcactctgacttaatggaggttttacacactgaagtccaaggtgtgatc
acccccctcacactacaggttgatccccttgtttaccagagtccatgtttccttggtaca
ggcttatctcgggagcagaggagtactctacagaggtgtgcctccaaactacaggccagg
gtcgtggagggattttgtccagaggtgacccatgtagtgagtggctgtaacaatgagggc
ctgtgtccccgcactatcaagtacttacaaggtgtactctctggccgatggatagtcaac
atggaatgggtagaaatgagtcttgaatatggatcaaagctggtggaggaggcgtttgag
attccaggcaccagtaccgaccctcaatctggagcagctcaaaaagggcggatcaacaga
cagaaacagcttcctgggttatttgatgggtgccaattttacttctatggacactttgaa
taccccactccagatagagaggatctggtcagcctggtgaagttaggcgggggacaagta
atccagcgtgaacccaaacctggtcacatccccgagacacagctgaccacaccctaccac
gcccccgcaggctccgagacttgctgtatatacattgtccatgacaacagggccacattc
cagcccattacaacaagtgctttgtgtacagtgagggctgcatggataatggactgtatc
agtcagttcagattgatcaatgttggctccgattgttga
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