Magallana angulata (Portugese oyster): 128163589
Help
Entry
128163589 CDS
T09348
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128163589
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128163589
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128163589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
Beta-prop_THOC3
WD40_Prp19
WD40
zf-RING_5
zf-rbx1
WW_TCERG1
zf-Nse
NBCH_WD40
Beta-prop_EML_2
WD40_like
WD40_WDHD1_1st
zf-UDP
Beta-prop_SPT8
zf-ANAPC11
Beta-prop_ACSF4
zf-RING_4
DUF2740
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
128163589
NCBI-ProteinID:
XP_052683180
LinkDB
All DBs
Position
1:complement(31206822..31216169)
Genome browser
AA seq
730 aa
AA seq
DB search
MSAASDGDDNESNTVSETGPSLQAGSITDTIQTSPSGSRVFIHNDLASPSTSLNQQTLAG
FFTGSRRGAGRSDVSHRTAPVHLGPAPPLPVFNISENPGPSSIVNLDRGDGEISENRGDR
SPEVISSEGEDSRSSNQDVEIVSDPEEENSNPPIAAPLVVENAEVPGQEAIPQLPVTDVQ
NTGSAQATSPGPQLETPAASNVQLIQASTSSPSDFRTPKRRRVMSTPDKPKGASDHQEND
DEDGNSCPICFEEWSTSGSHRLASLRCGHLFGQSCIEKWLKGQGGKCPQCNCKAKRQDIR
VLYAKSLKAVDTTERDRALQELEKEREVRRKVEMEAAQCRLQYQLAIEECNRLKTELDKV
KRQLQTSRSDASSGSAASQSQVRDVNGHFVLDKTIKIWEAGNCRVMSYSPSLATLVVSQP
SSSPLFPGFGFKKISCMDFKTSQYLTVHSKAIRDCCFHPFVDDGILLSCGLDKTAKMTSV
ISNTVVQTYNLSNPVWSCVWNTDDRNFFYAGQANGNVMEFDIRNTSEHVQELNTEGIRSP
VVSLQYIPKDIQAGFRPGGLVVGQLNKISFYEKKQDNQYRLHMLPLEGNLTSLCFESHTR
HLLASFRPTSKHPTSRHQLCEMTCVNLSVDPAVIDNGCSCHVVHTFHGSQTQTVLTRALL
MTHPAEDSRMLVCAGEETSSGVHIWDTSSSQLVQRLPAGGVVVDTCTLRLNQQTYLAALT
EKNLKVYRWC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcgagtgatggagacgataatgaatcgaatacggtatctgagactggcccc
tctctacaggcagggagtataacagatacgattcaaacgtcgccaagtgggagtagggtg
ttcattcataatgacctagcatcaccatctacttcattaaatcagcagactttggctgga
ttcttcactggcagccgtcgaggagctggaagaagtgatgtctctcaccgtactgcacca
gtacatttaggaccagccccacctttacctgtgttcaatatctcagaaaacccaggtcct
tcaagtatagtgaatttggatagaggagatggagagatttctgagaacagaggtgacagg
tcacctgaagtgatttccagtgagggggaagattcaaggtcatcaaaccaagacgtggaa
attgtttctgaccctgaagaagaaaactccaacccaccaatagctgctcctctggtagtg
gaaaatgcagaggttcctgggcaagaagctatacctcaattacctgtgactgatgttcag
aataccggtagtgctcaagcaacctccccgggtccgcagcttgaaacacctgcagcctcc
aatgtacagctaattcaggcttcaaccagttccccttcagacttcagaactccaaagcgt
cgacgagtgatgtctactccagacaagcctaaaggagcgagtgatcatcaagaaaatgat
gatgaagacggaaatagctgcccaatttgttttgaggaatggtccacctctggatctcac
agactagcttctttaagatgtggtcatttatttggacaaagttgcattgaaaaatggttg
aagggtcagggtggtaaatgtccccagtgtaactgtaaagccaagagacaagacatcagg
gttctttatgccaaatcattgaaagctgtcgacactacggagcgagacagggcattacaa
gagttggagaaagagagagaagttcgtagaaaggtggaaatggaagctgcacagtgtcgt
ctacagtaccagctagccatagaggagtgtaacagactgaagacagagctagacaaagtc
aaacgccagctacaaactagcagatctgatgctagctctggttcagcggcatcccaatcg
caagtccgagatgttaatggtcactttgtgttggacaaaactatcaagatctgggaggct
ggaaactgtagggtgatgtcctactccccctccctggccactctggttgtctcccaaccc
tcatcaagtcctctgtttccaggatttggtttcaaaaagattagttgcatggatttcaaa
acctctcagtacttaactgttcacagtaaagctatccgcgactgctgcttccacccgttt
gtggatgacggaatactcctgagctgtggattggataaaacagccaagatgacaagtgtc
atcagcaatactgttgtacagacatataatctctccaatcctgtctggagctgcgtgtgg
aacacagatgacaggaattttttctatgctggacaagccaacgggaatgtaatggagttc
gacattcggaacacctctgagcatgtccaggaattgaatactgagggtatacggtcacct
gtggtatcattacagtacattccaaaagacattcaagcaggctttaggccagggggatta
gttgtgggccagttgaataaaatcagtttctatgagaagaaacaagataaccagtacaga
ctgcacatgctgccactagaaggtaacttgaccagtttgtgctttgagagccacaccaga
cacctgttagctagcttcagacctacttctaaacatcccaccagtagacatcagctgtgt
gagatgacctgtgtgaacctgagtgttgaccccgctgtcattgacaacggctgtagctgt
cacgtggtccacacgtttcacggcagtcagacacagacagtgctgaccagagctcttctg
atgactcatccagcagaggacagtaggatgcttgtgtgtgccggggaggaaacttcatca
ggggtccacatctgggacacatcgtccagtcagctagtccagcgcctgcctgcaggaggg
gtggtggtggacacttgtaccctgaggctcaaccaacaaacctacctcgctgccctcacc
gagaaaaacctcaaagtctaccgctggtgctga
DBGET
integrated database retrieval system
