Magallana angulata (Portugese oyster): 128164011
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Entry
128164011 CDS
T09348
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04512
ECM-receptor interaction
canu04517
IgSF CAM signaling
canu04518
Integrin signaling
canu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128164011
04517 IgSF CAM signaling
128164011
04518 Integrin signaling
128164011
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128164011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128164011
04515 Cell adhesion molecules [BR:
canu04515
]
128164011
04090 CD molecules [BR:
canu04090
]
128164011
Exosome [BR:
canu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128164011
Exosomal proteins of other cancer cells
128164011
Cell adhesion molecules [BR:
canu04515
]
Integrins
Integrin alpha subunits
128164011
CD molecules [BR:
canu04090
]
Proteins
128164011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
128164011
NCBI-ProteinID:
XP_052683679
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All DBs
Position
9:complement(32561981..32584302)
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AA seq
1102 aa
AA seq
DB search
MTVSMFTGFFGSILLLVKLCCHVGLGYNIDTEFPQIFRGPSGSRFGVTAEIVKTVSNSWI
LVGATGDNFTDKPEIPEPGNVYACPVNFNVDAKCSILPNLRTAESTSTVKPSGVFEQRQQ
LLGATIHVPKNRDSPILICAPKWRNLRFFSPSNSQLESYQVVGNCFKLPNRNDLNQTTLN
MFRMNMTMIRDYYRDPMFGFSLTDSPHPSFDVIFSTPNAGSASTGGTFAQAHNPTRTQPF
IIENSELITTYVSGSYFAYSLATGQFGSSGYYYVAGAPGFSNLNGVVGSFSILEVNGVSE
QQVKLIEGLQIGGGFGQTLVIADVNADGHDDILVGAPNTYLNDVNKNRVIYDVGAIHVFY
GNGDPATLINQDPHTIMGTRKLGSRFGTAISSVGDLNKDGINDIAVGAPYEEGTGVVYIY
NGNTPRMEDKYSQRILGKEIRAGVSGFGYYISKFGEDLDENKYNDFAVGAYKSDEVVLLR
ARPIVEVRVYSRIDPDPVPLTSTGTPCGSQGSQGSTNPCFTASLCFDFTGEGTNKTYIDV
EIFADTERGRPRVSFEGAGQQDSFNVSLFEIYSYRVRCLNVTLRTLVVDRQFFELIEIPV
VLMTTFRLSTESVPSTVRAILKRNVPTMLKSQVSFDTGCKSLTCFSNLQLVSLMDKNTFM
IGQDKDLSLNTVVKNFGEPSFMTELKIIYPSIFSYSGVRTELFSEKITCNPVPTSGNTAV
LSCRLDTPFYAHMVVNVTIYFYLTDAIITNPDILSSSGLTFSSSVSTNHDTDPNNNADTK
TVQLAMLTDVSLKIASSAEQILATNNTVSFTTSYTLYNDGPCQIEAALIYFSFPVLYEEK
VWIDEDNSMPTPSNIGDKCILKYHPEQVNVASGNSPASVTFTVSRKFVQRPIAQKPETSQ
TMFCDDLSSGYDCAIVECTMYNVKPTETDKRTFSLAFELETDLLPPLQKGKAFLTFVTQA
AVYPTPSNKIPLYFINNVTGEVSVDILLSELFSQPAEEVEVWVIIVACLLSILLFIVVIV
VLWKCGFFERKKRKELNAFKRKTQMSIRSARSGGAGSVKSRRSNTAGSFRVKKMGDDHVK
LHDQKAEDNTDNSTMESATECK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatcgatgtttactggtttttttgggtcgatcttgctgttggtgaaactgtgt
tgccatgttgggctgggatataacatcgataccgaatttcctcagatattccgagggccg
agtggttcgagattcggcgttactgctgagatagtcaaaactgtgtctaattcttggatt
cttgtaggagccacaggagataactttaccgataaaccggaaataccagaacccggaaac
gtgtacgcatgcccagtcaacttcaatgttgatgccaaatgctccattttaccgaatttg
cgaacagctgaatcgacgtcaaccgtgaaacctagcggagtgtttgagcaaagacagcaa
cttctaggggcgacaattcatgttccgaaaaatcgtgattctcctatactgatttgcgca
ccgaaatggcggaatttgcgcttcttttccccatcaaactcccaactagaatcgtaccag
gttgttggcaattgtttcaaacttcccaatcgaaacgatctgaatcagacaacgctcaat
atgttccgaatgaacatgacaatgataagggactactacagggatcccatgttcggattc
tctctgactgattccccgcacccatcctttgatgttatattcagtacaccaaacgcgggt
tcagcatccacgggtggaacttttgcgcaggcgcacaacccaacacgtactcagccattc
atcatcgaaaactccgaactcatcactacctatgtatcaggatcttattttgcctatagt
ttggcgaccggacagttcggtagtagcgggtactactacgtcgctggagcaccggggttc
agcaatctaaatggcgtcgtggggtcgttttcgattctagaagttaatggagtctcggaa
caacaggtgaaattaattgaaggacttcagataggtggcggcttcgggcagacactagtg
atagcggacgttaacgctgatgggcacgatgatatcctggtcggggcaccaaacacgtac
cttaatgacgtcaacaaaaacagggttatttacgatgttggggccatacatgtattctat
ggaaacggggaccctgcgacattgattaaccaagatccacataccattatgggtacacga
aaactggggtcgcggtttggaacggcgatatccagtgttggggacttgaacaaagacgga
ataaacgatatagctgtgggcgctccatacgaagagggtacgggtgttgtttacatatac
aacgggaacacacctagaatggaggataagtactctcagagaatccttggaaaagaaata
cgagctggagtttctggtttcggttattacatctcaaaatttggagaggaccttgatgaa
aacaaatacaatgactttgctgttggcgcctataagtcggacgaagtagtcctcctgaga
gcccggcccattgtggaggtccgggtttattcccggatagatccggatccagtccccctt
acctcaaccggaacaccctgtgggtcacaggggtcacaggggtcaacgaatccgtgtttt
accgcgagcctctgttttgacttcacaggggaaggcacaaataaaacatatatagatgta
gaaatatttgccgataccgagagaggtcgacctagagtgtcgtttgaaggagctggtcag
caagacagctttaatgtctctctgtttgagatctacagctacagagtcaggtgtttgaac
gtcacactacggaccctggttgtggatcgccaattctttgagctgattgagataccagtg
gttttgatgacgactttccgtctgagtacagaatctgtaccgtctacagtaagggccata
ttaaagagaaacgtgccgaccatgcttaaaagccaggtctcttttgacactgggtgcaaa
tctttgacttgtttttcaaaccttcagctcgtctcgctaatggataagaatactttcatg
attggtcaagacaaagatctcagtttaaacactgtagtgaaaaactttggcgaaccttcc
tttatgaccgaattaaaaataatatacccttctatattttcatactcgggtgttaggaca
gaactgttttcagagaaaataacgtgcaaccctgtaccgacttccgggaacactgccgtc
ttatcatgccgcctggacactccattttacgcccacatggttgtcaatgttacaatatac
ttttatctaacggacgctatcatcactaatccggatattttgtcctcctctggtttgact
tttagcagcagtgtatctaccaatcacgacacagatccaaacaataatgccgacaccaag
actgttcagcttgcaatgttaacagatgtttcattaaaaatagcctcctctgcggaacaa
attctagcaacaaacaacactgtatccttcactacaagctacacgctatataacgatggt
ccatgtcaaatcgaggcagcattgatctatttctcttttccggttctatacgaagagaaa
gtgtggatagacgaggacaactcaatgcctacgccatcaaatataggtgacaaatgcatc
ttgaaatatcaccctgaacaagtcaacgtagcttccggaaattccccagcttctgtcacg
ttcactgtcagccggaagttcgtacagcggccaattgcgcagaaaccggaaacatcacaa
acaatgttttgtgatgacctgagtagtggttatgactgtgcaatagttgagtgcactatg
tataacgttaaacctacagaaactgataagagaactttttcattggcattcgaactggaa
acagacctgcttccacccttacaaaaggggaaagcctttttgacgtttgtgactcaagca
gcagtctatccaacgcccagtaacaaaatcccactatattttataaataacgtcacaggc
gaggtgtctgtggatatcttgttatctgagctgtttagtcagccagctgaggaggtggag
gtctgggtcatcattgtcgcctgtctcctcagtatattactatttatcgtggtcatcgtt
gtgctgtggaagtgtggattttttgaaagaaagaaaagaaaagaacttaatgcattcaaa
agaaaaacgcagatgtcgattcgaagcgcgcgtagtggtggtgccggctcagtaaaaagt
cggcgtagtaatacagcaggatcatttagggtcaagaagatgggagacgaccacgtgaaa
ctccatgatcaaaaagccgaggataacaccgataattctacaatggaaagtgcaactgaa
tgcaaataa
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