Magallana angulata (Portugese oyster): 128164306
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Entry
128164306 CDS
T09348
Name
(RefSeq) integrin beta-1-B-like isoform X1
KO
K05719
integrin beta 1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04145
Phagosome
canu04512
ECM-receptor interaction
canu04820
Cytoskeleton in muscle cells
canu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
128164306
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128164306
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128164306
09142 Cell motility
04820 Cytoskeleton in muscle cells
128164306
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128164306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128164306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128164306
04515 Cell adhesion molecules [BR:
canu04515
]
128164306
04090 CD molecules [BR:
canu04090
]
128164306
Membrane trafficking [BR:
canu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128164306
Exosome [BR:
canu04147
]
Exosomal proteins
Proteins found in most exosomes
128164306
Cell adhesion molecules [BR:
canu04515
]
Integrins
Integrin beta subunits
128164306
CD molecules [BR:
canu04090
]
Proteins
128164306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
vWA_SIBA-E
WLS-like_TM
Collectrin
Motif
Other DBs
NCBI-GeneID:
128164306
NCBI-ProteinID:
XP_052684054
LinkDB
All DBs
Position
9:complement(25970018..25994725)
Genome browser
AA seq
800 aa
AA seq
DB search
MVSTVWFLCFTTIFCSLNPIGKLSAQDLRTDTLTPTQENPCLKEKTTTCGECIAISTLCA
FCTDAEYDANNYPRCDLLTTHQKLINNKPRCKDIVNPSSTLVKSKDDRLIDGDRDRYAVQ
IRPQQIDLELRPNDPQTFNLTFRLAENYPVDLYYLMDLSNSMADDKEKLASLGVKIAEDM
STITKNFKLGFGSFVDKVVMPYVSTAPNKINSPCPGCEKAYGFRNVHPLDPNATLFRDKV
NAAKVSGNLDAPEGGFDAIMQAIACETEIGWRNRSRRMLLFSTDAGFHYAGDGKLGGIIQ
PNDGNCHLSPDGMYTESSNQDYPSISQVAVKAKEKNVNIIFAVTNDQKNIYDQLKPIIAG
SETGVLASDSQNVVKLVRDNYLAITSKVEMIVENSDNLEVKFRTKCKGTEEKETNKCENL
AIGESVDFSVTVEVKSCPPKGEEERTLRIKPVGLYDDLTVKLKLMCQCDCESPKQMEDNK
NHEKCNGNGTYVCGMCVCNEPYFGDYCDCDKGTGTIADKESECIQDKNTTIICNGRGECN
CGTCTCRERQKGTNHFYTGRYCECDDYSCPYYAGLICGGLGRGQCDCGNCKCNAGFNGTN
CGCNTDNSTCMYNGLLCNDKGTCECGKCTCTDPKYFGPQCQECDNCGQEQCRTHQDCALC
NRTNAGVLTKEQCEKECSHTTAVDKIRNGITNCEYVDQNGCFIYFTYFYDDDGTLRVEVQ
KEPECPPEVNVLAIVLGVIAGIVFFGIILLLIWKLFTTISDKRELARFEKEAMNARWDTG
ENPIYKKATSTYQNPVYGKK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgacggtttggtttttatgttttacaacaattttctgttctctaaatcctatc
gggaaattgagtgcacaagatttacgaactgatactttgacgcctactcaggaaaacccg
tgcctaaaggaaaagaccacaacatgtggggagtgtatagcaatatctaccctgtgtgca
ttctgtaccgacgctgagtatgatgccaataattatcccaggtgtgacctgctgaccact
catcagaaactcatcaacaacaagcccaggtgtaaagacatcgtcaatccgtcatcaaca
ctcgtaaaaagcaaggatgacagattgattgatggcgatagggacagatatgccgtacag
atcagaccccagcaaatcgacctggagttacgtccaaatgaccctcagacgtttaatctg
acgttccgattggctgagaactatccagtcgacctctactaccttatggacctctcaaac
tccatggcagacgacaaagaaaaactggccagtcttggagtcaagatagctgaagacatg
agcaccatcactaagaacttcaagctgggttttggttcctttgtggacaaggttgtcatg
ccctacgtcagtacagccccaaataaaattaacagtccttgtccaggttgtgagaaggcc
tatggatttagaaacgttcacccactggacccaaatgcaacactgttcagggacaaagtc
aatgcagccaaggtatctggtaaccttgatgctcccgagggtgggttcgacgccatcatg
caggccatagcttgtgagacagagattgggtggaggaaccgatccagaagaatgttgctg
ttctccacagacgctggatttcattacgctggggacggaaaacttggaggcatcattcaa
cccaatgatggaaactgtcatcttagtcctgacggaatgtacacagaaagttctaatcag
gactacccctctattagtcaagtcgcggtgaaagccaaggaaaagaatgtcaacatcatt
ttcgccgtcaccaacgatcaaaagaacatttatgatcagctcaagccaatcattgcggga
tcggaaacgggagttttggcgtcagactcacagaacgttgtcaagctagtccgagacaac
tatttggccatcacatcaaaagtagaaatgattgttgaaaactcagacaatttggaggtg
aaattcaggacaaaatgtaaaggaactgaagagaaagagacaaacaagtgtgagaacttg
gccattggagaatctgtggatttcagtgtgacagtggaagtgaagagttgtccccccaaa
ggtgaagaggagaggaccctcaggatcaaaccagtcggactgtatgatgatttgactgtc
aaactgaagctcatgtgtcagtgtgactgcgagtccccaaagcaaatggaggacaacaag
aaccacgagaaatgtaatggaaacgggacgtacgtgtgtggaatgtgcgtgtgtaacgag
ccgtactttggagactattgtgactgtgacaagggcaccgggaccatcgctgacaaggag
tctgagtgtatccaggacaagaacacgaccatcatctgtaacggtcggggagagtgtaac
tgcggaacgtgcacgtgtcgggagcgacagaagggcaccaaccacttctacacaggcaga
tactgcgagtgtgatgattacagctgtccctactatgctgggctgatctgtggaggtctg
ggtcgcggacagtgcgactgtggaaactgtaagtgtaacgccggtttcaatggcacgaac
tgcggatgtaacaccgacaactctacctgtatgtacaatggattgctgtgtaatgataaa
ggaacttgtgagtgtggcaagtgcacatgtactgatcctaagtactttggaccccagtgt
caggaatgtgataactgtggccaggagcaatgtcgtacccaccaggactgtgcgctgtgt
aacagaaccaacgccggggtactgaccaaggaacagtgtgaaaaagagtgctcccatacc
actgccgtcgacaaaatcagaaatggcatcactaattgcgagtacgtagaccagaacggc
tgctttatttactttacctatttctatgacgatgatggcacactgagggtagaagtccaa
aaagagccagagtgtccccccgaggtcaatgtccttgccatagtcctgggggtgatagct
ggcatcgtgttctttgggattatactcctcctgatttggaaactattcaccaccatcagt
gataaaagagagctggccaggttcgaaaaggaggccatgaacgcccgatgggatacggga
gagaacccaatctataaaaaagctacttccacataccaaaacccggtgtacggaaagaag
tga
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