Magallana angulata (Portugese oyster): 128164435
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Entry
128164435 CDS
T09348
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128164435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128164435
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128164435
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128164435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Chromo_2
DUF6987
DUF948
DUF745
Motif
Other DBs
NCBI-GeneID:
128164435
NCBI-ProteinID:
XP_052684195
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Position
10:complement(8432006..8446880)
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AA seq
760 aa
AA seq
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MADRRKLQGEIDRCLKKVQEGVESFEDIWQKVHNAANTNQKEKYEADLKREIKKLQRLRD
QIKTWCASSDIKDKRCLVENRKLIETQMERFKVVERETKTKAYSKEGLGAAAKLNPAAKE
KSEMTNWLSQTIDNLNIQLDQFESHVEKLTSKKKKMDKDKQDRLEELKGHMERHKYHLKQ
LETILRMVDNDAIPLDQVSYQKIKKIKDDVEYYVDFNQEPDFEENEFLYDDLDLEDLVGA
QLLASSPPNDDINMETLSSTPTSTNSSSPSPSPSLSLNHSKEKSDDERKRHKSQNDEKSI
PVISSPSSTNSSSSSVPLNIKVPSTPTKLFQGNSSTIESSNSNHRPDSTPPPLTGFSSVA
ASSQQNNNTGITIPRLPVSSTVWQGDSSPMKLSYLTDRFVKRDTKNQVNAMDHSALNSNL
TVNSSMSSVTHSNSNSVSVTSVGNPSLVPAPSPLFTNNGTTVPYSISMPMVVSNSVPTSN
SHTSQTTNGPNSLPPSTEVVMNGPLSAGAPGLKGISSMDDSNSESMSSLKSIAQQAVVNA
GLENQIPTPPPMSTESRLQFSSSTSLPTTIPTSSQVVSQSTSLSPSDQTSQQPQTTTIHL
NPLLGVAPLGPVPLSRENFYQLQMLEAAYHHLPHPSDSERQRSFLPRNPCPTPSYYPQLP
PPSADSVEFFQRLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHTRYMMWFQRHEEPK
TITEDYEQGTYIYFDYEKWCQRKKEGFTFEYRYLEDRDLN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctgataggcggaagctacaaggtgaaattgacagatgccttaaaaaagtacaagag
ggagtagaatcctttgaagacatctggcaaaaggtgcataatgcagcaaacacaaatcaa
aaagaaaaatatgaagcagatctcaaaagagagattaaaaaactgcagcgtctacgtgac
cagatcaaaacgtggtgtgctagcagtgacatcaaagacaaaagatgtctggttgagaac
aggaaactcattgagacgcaaatggaaagattcaaagtggttgaaagagaaaccaaaact
aaggcatactcgaaggagggacttggggctgctgcaaaactaaaccctgcagctaaggag
aagtcagagatgaccaactggctctcgcaaaccattgacaatttgaatattcagttagat
cagtttgaaagtcatgtggaaaagttaacatcaaagaagaaaaagatggacaaagacaaa
caagatcgactcgaggaacttaaagggcatatggaaaggcataaataccatctaaagcag
ttagagaccattcttcgaatggtagacaatgatgctattcctctggatcaggttagctat
caaaagattaagaagatcaaagacgatgtcgagtattatgtggattttaaccaggaacca
gattttgaagaaaatgaatttctctatgacgacttggatctggaggacctagtaggtgca
cagttgcttgcatcttcaccaccgaatgatgacatcaacatggagacgttatcaagtact
ccaacttcaacaaattcaagttcaccctctcccagtcctagtctgagtttgaatcattcc
aaagagaagtcagatgatgagaggaaaagacacaaatcacaaaacgatgaaaagtcaata
cctgtgatttcttctccatcctcaacaaattcatcttcatcatcagttcctctcaatatc
aaagttccatcaacgcctacaaagttattccaagggaattcctcaacaatagaaagttca
aatagcaatcatcgtccagattccacaccgccacccctgacaggattctcctcagtagca
gccagttctcaacaaaacaacaatacaggtataaccattccaaggttacctgtcagttca
actgtatggcagggggatagttcccccatgaagctttcttacttaactgaccgttttgtt
aaaagggatacaaaaaatcaagtgaatgcaatggaccactcggctttaaatagtaatttg
acagtgaacagcagtatgtcatccgtgacgcactcaaattcaaactctgtctcagtgact
tctgtaggaaatccctctttagtgccagccccatcaccattgtttacaaataatggaaca
acagtgccctattcaatttcaatgccaatggttgtatcaaacagtgtaccaacaagcaac
tcacacacaagtcagacaacaaatggacccaactcacttccaccctcaaccgaggtagtt
atgaatggacctttgagtgcaggggcaccaggattaaaggggatcagtagcatggatgac
agtaactcagaatccatgtcttcattaaagtctatagcacagcaagcagtggtcaatgcg
ggtctagagaatcagataccaacgcctcctcccatgtcaacagaatcgagattgcaattt
agtagttccacgtcgttgccaacgacaataccaacttcgtcacaagtggtgtcacaaagt
acgtcattatcacccagtgatcagacgtcgcaacaaccgcaaaccaccactattcacctc
aacccacttttaggcgtggcgcctcttggtccagtacctctcagcagggaaaacttttac
caattacagatgttagaagctgcatatcaccacttaccacatccctcagattcagaaagg
cagaggtccttccttccccgaaacccttgtccaacaccctcctactacccacaactgccc
cctcccagtgcagactctgttgagttttttcaacgactatccacagaaacactcttcttt
atattttattatatggagggtacaaaagctcaatatttggcagcaaaggctttaaaaaag
caatcctggcgatttcatacacggtatatgatgtggtttcagcggcatgaggagccaaag
acaataacagaggattatgaacagggcacatacatttattttgactatgagaagtggtgc
caaaggaaaaaggaaggttttacatttgaataccggtatctggaggacagagacttgaat
taa
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