Magallana angulata (Portugese oyster): 128164485
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Entry
128164485 CDS
T09348
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128164485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128164485
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128164485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128164485
NCBI-ProteinID:
XP_052684289
LinkDB
All DBs
Position
10:complement(15115841..15128640)
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AA seq
731 aa
AA seq
DB search
MSRHRNVRTMNFEDEYFDEDEVYGHSYDDSYCVSPATAAQFTFNRERDVNLSSYMEEGIP
EEEDESDPEPLSDSGRDNLKLDDVEQAKLNSCKEEIVNVIGDTIPEHIVSQAVVKHQYNI
QAALNELLNQSEAPKPQREPRPDRRANRQEFAPVQPTVQLKTPVKKNTTSDLAQATSATS
QIKLETSNQTVKSANNSETVFGTEKNTVKDLRTKAGNLNANNEVDVTDSAVLNDSKLQAV
NSEIDLVGDLVGRDLDTPSKSSSSSVPATPKSTSKVKQDKAKLKEEYERRKTGKDLLNLV
VIGHVDAGKSTLMGHLLYQMGMVNKRAMHKYEQESKKRGKGSFAFAWVLDETEEERTRGV
TMDIAQTAFETPHKQITLLDAPGHKDFIPNMITGAAQADVAILVVNATRGEFETGFESGG
QTREHALLARSLGVSQLLVAVNKMDTVDWSQSRYDDIVKKLGLFLKQAGYKDIDLSYIPC
SGLGGENLTKAVSEPKLASWYKGSTLVEQIDKFKAVERPMDKPFRLIISDVFKGLGSGFS
VVGRVSSGSVQAGDRVLVQPAGDLAVVKAVTMDDSDNTCGFAGDHVTVVLTGMDMAHVNV
GSVLCDPQNPIKSAMRIRARIVIFNLELPITRGFTVVFHYQSITEPAIIKRLNCQLNKNT
GEVIKNKPKCLVKNSSAVVEIEFERPVCLEMYKDYKDLGRFMLRQGGHTIAAGLVEEVLK
TKSKTEENSTE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcaccgtaacgtacgcacaatgaactttgaggatgaatattttgatgaagat
gaagtctatggacattcctatgatgatagctactgtgtctcaccagccacagctgcacaa
ttcacatttaatcgagaaagagatgtcaacttgtcatcctacatggaggagggtattccc
gaggaggaggatgaaagtgacccagagcccctcagtgactctgggagggacaacctcaaa
cttgatgatgttgaacaagctaaattaaattcctgtaaagaggaaatagtgaatgtgata
ggcgacaccattccagagcacatcgtgtctcaggctgtggtcaaacaccaatacaacatt
caagctgcattgaatgaacttctgaatcaaagcgaggcgcctaagccacaaagagaacca
aggcctgacaggcgagcaaacagacaagagtttgcacctgttcagcccactgttcaatta
aaaactccagtcaagaaaaatacaacctcggacttagcccaagctacctctgccacctca
caaataaaactggaaacctcaaatcagactgttaaatctgcaaataactcagaaactgtg
ttcggtactgagaagaatactgtgaaagacttgcgcacaaaggcagggaatctaaatgca
aacaatgaagtggatgtcacagacagtgcagtgttaaatgattccaaacttcaggcagtg
aattctgaaatagacctagtcggagaccttgttggtagggacttagacactccaagtaaa
tcatctagcagcagtgttccagcaactcccaaaagtacttcaaaagtaaaacaagacaaa
gccaaactaaaggaagaatatgaaagaagaaaaacaggcaaagatcttctgaacttggtt
gtcattggtcatgtggatgctggtaagagtacattgatggggcacctgttgtatcagatg
ggcatggtcaacaagagagccatgcacaaatacgaacaggagtcaaagaaaagggggaaa
ggatcctttgcttttgcatgggtcttggatgaaacagaagaagaaaggacaaggggggta
actatggacattgctcagacagcatttgaaactcctcataaacagataacactgttagat
gcacctggacataaggactttattccaaatatgatcacaggtgctgcccaggctgatgtt
gctattctggtggtcaatgccacgaggggggagtttgagacagggttcgagtcaggtgga
cagaccagagaacacgctctgttggcgcgatcattaggtgtgtcccagttgttggtagca
gtcaacaagatggatactgtggattggtcacagagccgttatgatgacatagtgaaaaaa
ttgggactctttttaaaacaggcagggtataaggacattgatttgtcctacattccctgc
agtggactagggggagagaacctgacaaaagcagtctcggagccaaagcttgcctcatgg
tataaaggaagcacactggtggaacaaatagacaagttcaaggctgttgaacgccccatg
gacaaacctttccgtctgatcatcagtgatgtttttaaggggctgggaagtggattcagt
gtggtggggcgggttagctcaggctccgtgcaagctggtgacagagtcctggtacaaccc
gctggagacctagctgttgttaaagctgtaacaatggatgattcagataacacttgcgga
tttgctggggatcacgtaactgttgttttaacaggcatggacatggctcatgtaaatgtt
ggtagtgttctatgtgatccacagaatcctattaagtctgccatgaggattcgtgcaaga
attgtcatttttaacttagaattgcccatcactagaggatttaccgtcgtgtttcattat
caatctataacagagcctgccattattaaacgcctgaactgtcaactcaataagaataca
ggagaagtcataaaaaataaacccaaatgcctggtaaagaacagcagtgctgtggtggag
atcgagtttgagcggccagtctgtctagagatgtacaaagattacaaagatctgggcagg
tttatgctgcgacaaggaggccatacaatagctgctgggctggtggaggaggttcttaaa
acaaagtcaaaaacagaagaaaactcaacagaatga
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