Magallana angulata (Portugese oyster): 128164701
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Entry
128164701 CDS
T09348
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128164701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
canu02000
]
128164701
Transporters [BR:
canu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
128164701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
ABC2_membrane
AAA_22
AAA_29
TsaE
AAA_16
AAA_30
AAA_23
Rad17
AAA
Zeta_toxin
AAA_15
AAA_19
Motif
Other DBs
NCBI-GeneID:
128164701
NCBI-ProteinID:
XP_052684649
LinkDB
All DBs
Position
10:complement(38919441..38959927)
Genome browser
AA seq
1751 aa
AA seq
DB search
MSVQKSVFQDPERQYLLDKEEDQEEKMATFIQQFKALMYKHILYKKRNKGQLIQEIVYPI
YFVGILAMIKAFLPLDPLPAIPSFPLVRPENFTLEYTDKILVCPNDSLTQAIAGDAAGIF
KQIMGLNVTPSLEFYPDDVKMVAAFQEKYSQIKGFTGLQFNYNGANLSYAIRMRISDIGD
TKTLAYYRTTNEQCRQGTGLDSSSCDVLKYMHTGFSMMQMAADTALMRHHTGVTAIQPLD
LSFQLMPMDKYQPDTSYIQIISSLYFVLAYAQFVNFLTANIVNDKEKKIKEGMKMMGLRD
SAYWASWAAVYFVLITVVTIVVTLIAYLAQFYKNSNMFLFFLILELYGLSLISFSWLITP
FFQKAQTAGGLASLISMVTSLLYLAVSMTRTVTSTGEVTYTIPPVGRAFLSLISPCGVAL
AIDQSLFLDITVGMDFETIKSGDFPLYGYLLMLVLDAVLYYMLAIYLDNIVPGNYGPRFP
PYYIFMKSYWFQSKSSKYNSKADDTDLFFGNDVEHVTQETREKQGIRIYNITKEFPSKEK
EKEKVKAVEDLSLEMYEGQITCLLGHNGAGKTTLLNMLSGLVPPSTGTAIVQGYDVSNPS
DVVRMRAITGVCPQHDILFDVLTCVEHLTFYAGLKGITGDELKKRINQTIKDVGLEDQKD
TFAKDLSGGQKRKLSVAISLIGDPKIIYLDEPTAGMDPYSRRHLWNVLKEKKKNRLILLT
THFMDEADILADRKAFISKGKLRCCGSSLFLKSRFGIGYHLNMVVEPNCKESNVTDFVRG
HIEGAEFTRVHGKELSYTLPLNQVSQFSALFSDMESTSGMSSKAESLGIKSYGVSMTSLE
EVFMKLEEDDVSKKLNERTEPVIEDENGHFPHNRVSPLTVGDTCHTQVTIDTDLLDLEKQ
TENLSKRQFKAMVKMWILLNFRNKANLVFSLVLPVIFVIIGLVVNKTSSNVTYDSKPTPI
SLQGLPSYARSKVYPSAVPGLLLNDSDGSPTSSEWTSLINRLYYTDGFSDSSNLLSMAPH
YAGMKVSQLQESGTPPKFDGAFTIFYNASATYSIPMLINALTNSILSLQANKTGSTAQVI
STTNLPWIADSGQNRFNNGAFSSIILIGMAFIAVAPTFAIYMVKDRETKVRTQLRVAGVS
FWMYWGTHLVVDIVKFSFPGILCVIVVLIIQLDSLSSAGAVGSLILLVLFYIPVAVLFSY
FASYMFQKAVTAQQFILTIFIFLGLLPYTAVSMLDMFALEKIARALHIVFSIIDPPYIIF
GGLYYIDKVYRVKTFYMLSTVDDADYFKMENNLVYTYLICLFDLVIISMLLRMLDIKHTG
GDVKDAFPCHQQEITVPHTNTDIIDNEDDDVKAERERVKDIFNKNNISKPVAIAENLRKE
FQKNKSQRKCCKKGQKDEIKTAVRNASFAVDDGEVFGLLGPNGAGKTTVINMIVAEIGPT
RGRVVVGGHDIQSSMSEAFQVMGYCPQHDALEELMTLKEHLVLYATIRGVQEDRVNDLAE
WFIEQLKVQEHANKRSKKLSGGTKRKLSYAISMLGKPRIVLLDEPSTGMDPASKRFLWDT
ITNSFQNKDRGAILTTHYMEEADALCSRVGIMVNGKLECLGPTQHLKNKFGSGYILEVKL
KAGIAHETQDSVEQRMNKLEEYVFSMFPDAVIVERFGLRAQYKIPRNNVKSLAHVFSSLE
EGKRTHDMEEYNFSQSSLEQVFLEFAKRQLDENVTDENVDNEQNSLEQSLRRRTSSRDQG
RNSSQGSGNVV
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcaaaaatctgttttccaagatcctgagagacaatatcttctggataaggaa
gaagaccaggaggagaaaatggccacatttatccagcagtttaaggcccttatgtacaaa
catatactgtacaagaaaagaaacaaaggccaacttattcaggagatagtctaccctatc
tattttgtcggtatcttggctatgataaaagcctttcttccattggaccccctgccagcc
attcccagcttcccattggtcagaccagaaaacttcacacttgagtacaccgacaagatc
ctggtgtgtccaaatgacagcctcactcaagccatcgctggagatgcagcgggaatattc
aaacaaattatgggtcttaatgttacaccttctttagaattctatcccgatgatgttaaa
atggtggcagcttttcaggaaaaatattcccaaattaaagggttcacaggattgcagttc
aattataatggagcgaacctgtcctatgcaatcaggatgagaatttcagatattggagat
acaaaaacccttgcctattacagaactactaatgagcaatgccggcaaggcacgggcttg
gattcaagttcctgtgatgtcctaaagtacatgcacaccggattcagcatgatgcagatg
gctgcagacacggcgctaatgaggcaccacacaggtgtaacagcaatacagccgctggac
ctgtccttccagctaatgccgatggacaaataccagccggacacgtcctacatacagatc
atctcctccctctactttgtcctggcctatgcccaatttgtcaatttcctcaccgcaaac
atcgtcaatgataaggagaaaaaaatcaaggagggaatgaagatgatgggcttgagagat
tccgcctactgggcgtcatgggcggccgtatattttgttctaatcactgtggtaaccatt
gttgtgactctgattgcatacttggcgcagttttacaagaacagcaacatgttcctcttc
ttcctgattctggagctgtatggtttgtctctcatcagcttttcatggcttatcactcca
ttctttcaaaaagcccagacagcagggggattggccagtttgatctctatggtcacgtca
ctgttatacttggctgtcagtatgacccggaccgtgaccagcacaggggaagtaacctat
accatacctcctgtggggagagcgttcctaagtctgatatctccctgtggtgtagcttta
gctattgaccagagcttatttctggatatcacagtaggaatggacttcgagaccatcaag
tcaggagatttccctctctatggttatctgctgatgttggtgctagatgctgttctctat
tacatgttggctatctacctggataatattgtcccagggaattatggccccagatttcct
ccatattacatcttcatgaaatcttactggtttcaatcaaaatccagcaagtataatagc
aaagcagacgacacagatttgttctttggaaatgatgtggagcatgttacccaggaaact
agggagaagcaaggaattagaatttataacataacaaaggaattcccttccaaggagaag
gagaaagaaaaagttaaagctgttgaagatttgtccctggaaatgtatgagggacagata
acatgtcttttgggacacaatggagctgggaaaactactctgctcaacatgttaagtgga
ctggtgcccccttcaactggtactgcaattgtacaaggatatgacgtatcaaacccgtca
gacgtagtgaggatgagggccattactggagtctgcccacagcacgacatcctctttgat
gtcttgacctgtgtggaacatctgaccttctatgctggactgaagggcattaccggagat
gagttgaagaagaggattaatcaaaccatcaaggacgttgggctagaagaccagaaggac
acatttgccaaggacctgagtggtggtcagaagaggaagttgtctgttgctatatcgctg
ataggagacccaaagattatttacctggatgagcctacggcaggaatggatccatattcc
agaagacatctgtggaatgtcctgaaggaaaagaaaaagaataggttgattcttctgaca
actcattttatggatgaagcagacatattggcagacaggaaagcatttatcagtaaggga
aagcttcggtgttgtggttcctccttgtttctgaagagcagatttggaataggatatcat
ttgaacatggttgtagagcctaattgcaaggagagtaatgtcacagactttgtcagaggg
cacatagagggagcagagttcacacgagtgcacggcaaagaactctcctacaccctcccc
cttaaccaagtcagtcagttctcagccctattcagtgatatggagagtacatcaggaatg
tccagtaaagctgaatcccttgggatcaagtcctatggggtttccatgacatccttagag
gaagtattcatgaagctagaggaggatgatgtatccaagaaacttaatgaacggacagag
ccggtcattgaggacgagaacggacatttcccccacaatagagtcagcccactcacggtc
ggcgacacctgccacacccaagtcaccatagacacggatttactagaccttgaaaagcag
accgaaaatctctccaaacgccagttcaaggccatggtgaaaatgtggatccttcttaat
ttccgcaacaaggccaatctagtattctcgctggtgttaccagtgattttcgttatcatt
ggattggttgtgaacaagacttcttcgaatgtaacgtacgatagtaagccgacgcccatc
agtctccaaggcctaccatcctatgccaggtccaaggtttatccatcagccgtcccaggt
ttattactgaatgattcagatggttcaccaacaagttcggagtggaccagtctcatcaac
aggctctattacactgatggtttctctgactcctccaatctattaagcatggcaccacat
tatgctggcatgaaggtttctcagctacaagagtctgggacccctcccaagtttgacgga
gcttttaccatcttctacaatgcctcggcaacttacagcatcccaatgctcatcaatgcc
ctcaccaactccattctaagtttgcaagccaacaagactggttctacagcccaggtcatt
tctacaaccaacttgccgtggatcgcagattccggccaaaaccggttcaacaatggcgcc
ttttcctccatcatcctgatcggaatggcattcattgctgttgctccaacttttgctatt
tacatggtcaaagatagggagacaaaggtgcggacccagctgcgtgtggcgggggtgagc
ttctggatgtactgggggacccacctggtggtggacattgtcaagttcagcttcccagga
atcctctgtgtaatcgttgtacttatcatacagctggatagtttaagcagcgctggggct
gtaggttctctgatactgctggtcctgttttacatcccagtggctgtcctgttctcctat
ttcgcttcctacatgttccagaaagctgttacagcccagcagttcatcctgacaatattt
atctttcttggtttattgccgtatactgcagtgtctatgttggacatgtttgctcttgaa
aaaattgcccgagcacttcacattgtcttctccatcattgatccaccctacatcattttt
ggaggattgtactatattgataaagtgtaccgagtcaaaaccttttatatgcttagtact
gttgatgatgcagattatttcaaaatggaaaataatctcgtgtacacctaccttatctgt
ctttttgatttggtgatcatttccatgctgttgagaatgctggacatcaaacatacaggg
ggggatgtcaaggacgcatttccttgtcatcaacaagaaatcacagtgcctcacacaaat
acagacattattgacaatgaagatgatgatgtcaaggctgaaagggaaagggtcaaggac
atattcaacaaaaataatattagtaaacctgttgcaatagctgaaaacttgaggaaagaa
tttcagaaaaataaaagtcagcgtaaatgctgtaagaaaggccagaaagacgaaataaag
acagctgtcagaaacgcctcgtttgccgttgatgatggggaggtctttggattgttggga
ccaaatggcgccgggaaaacaacagtgattaacatgattgtagcagagattgggcccact
agaggacgggttgtagtgggaggacatgatattcagtcaagcatgtctgaggctttccag
gtcatgggctactgccctcagcacgatgccctcgaggagctgatgacgctgaaggagcac
ctggtgctgtatgccaccattagaggtgtgcaggaggacagagtcaatgaccttgcagaa
tggtttattgagcagctgaaggtacaggagcatgcaaacaaacgttccaagaaactgtca
ggtggaaccaaaagaaagttgagctatgccataagtatgctaggaaagcccagaatagtc
ctcttagatgagccttcaacaggaatggaccctgcctccaaaagattcctttgggacact
attaccaatagtttccagaacaaagataggggagccattttgaccacccactacatggag
gaagcagacgccctctgctcacgagtcggaatcatggtcaatggaaagcttgaatgtctt
ggaccaactcaacatttgaaaaacaagtttggaagtggatacatactggaagtgaagttg
aaggcaggaattgcccacgagacccaagattcagtggagcagagaatgaacaagctcgag
gaatatgtcttctccatgttccccgatgctgtgattgtggagagatttggactgagagct
cagtataaaatacccaggaacaatgtcaagtctctcgcccatgtcttctcatctctagaa
gaaggcaagcggacgcatgatatggaagagtacaatttcagccagtcatctttagagcag
gtgttcctggagtttgccaaaagacagctggatgagaatgttacagatgagaatgttgat
aatgaacagaattcgctggagcaatccctgaggcgtcgtacttcatctagagaccagggg
agaaatagctcccagggctcaggaaatgttgtgtga
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integrated database retrieval system
