Crassostrea angulata (Portugese oyster): 128164931
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Entry
128164931 CDS
T09348
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128164931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128164931
Spliceosome [BR:
canu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128164931
Complex C
U4/U6.U5 tri-SnRNP related factors
128164931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128164931
NCBI-ProteinID:
XP_052685002
EnsemblRapid:
LOC128164931
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All DBs
Position
10:complement(23147713..23151332)
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AA seq
331 aa
AA seq
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MANRTVKDAHSVKGTNPQYLVEKIIRTRIYECRYWKEECFALTAELMVDKAMELKYIGGV
YGGNVKPSPFLCLVLKMLQIQPEKDIVVEFIRNENFKYVRALGAFYMRLTGTTLDCFKYL
EPLYYDYRKLKIQNREGEFHLLHMDEFVDSLLRDERVCDIILPRIQKRHVLEENNQLESR
VSALDEDLEDMESDEEEPMERSPSPVDRRKSDRSSPSRHRRSPSPRSRDRRKRSRSRDRE
KRHRSRSPTDKRHRDDDRKKSKKHRHEHKSRDKDRDREKRSHRSSRHHKDDKDRSRDKDR
DKGGSRSDSKGDLSVAETNELRASLGLPPLK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacagtaaaagacgctcattccgttaaaggaacaaatccacagtatttg
gtggagaagatcataaggactcgaatatatgaatgcagatattggaaggaagaatgtttt
gcattgactgctgaattgatggttgacaaggcaatggaattgaaatatattggtggagtt
tatggtggaaatgtcaaaccatcacctttcctatgtttggtcttaaaaatgctccagatt
cagccagaaaaagacatcgttgtggagtttatcagaaatgaaaattttaaatatgtcagg
gctttgggagcattttacatgagactgacaggaactaccttggattgcttcaagtacctg
gagccactgtactatgattacagaaagttgaagatacaaaacagagaaggagaattccat
ttactccacatggatgagtttgttgacagcttactaagagatgaacgagtgtgtgacatc
attctccctcgaattcagaaacgacatgtcctagaagagaacaatcaattggaaagcaga
gtcagtgcgttagatgaagacttggaagacatggaatcagatgaagaggaacccatggaa
agaagtccctctcctgttgatagacggaaatcagacaggagttctccatccagacatcgc
cggtccccctccccacgcagcagagacagaaggaaacggtcaaggtctcgagacagagag
aaacgacatcgatccagatctcccacagataaaagacacagagatgatgatcgaaagaaa
agtaaaaagcatcgtcatgaacacaagagtcgtgacaaggacagagatcgggagaagcgg
agtcatcgcagtagtcggcaccacaaggacgacaaagaccgcagcagggacaaggacaga
gacaagggcggatcaaggtcggactccaagggcgacctcagtgtagcagagaccaacgaa
ctccgtgcatccctcggactaccacctttaaaataa
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