Magallana angulata (Portugese oyster): 128164964
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Entry
128164964 CDS
T09348
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128164964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128164964
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Pre-60S particles
RNases
128164964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Bacteriocin_II
GASA
Motif
Other DBs
NCBI-GeneID:
128164964
NCBI-ProteinID:
XP_052685052
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All DBs
Position
10:complement(18243955..18252556)
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AA seq
1159 aa
AA seq
DB search
MFSSGGYFRGFNCPFFASGLCERPYCHYRHVKTEEEKPQSKAAAGYSDAQYEVNWNPGKN
SSGSLGEHVKLNKYTGEPEISIDPKTADKETPPEEFENVNKYTGEPILTPETNEYIVEVK
TNCQNYKPTDKKSLKSRRPKLNIPKPVQKVNKYTGEPVVESVEKQAYTPEARDFPEYNPT
PINQLKPSPPKYKTDILDNENEQEYDPQSNFSTTSLLKPSQPLAIKRSFTYDPTTPDFHH
PAKKAKEEQEVPVSDNEDKSDDGELGMFSEDEEEMISESREDDVDTIDNEEENSSKPSMI
TDVKVFESLLMPVMDHDDSNDRLSDTEKTLSDSKKKFNEKTKHAKKSKTSDKTSDHSKKS
SNSSIQRNGHSSKEKVSKAESSKSSKSSSSSKSREQSSSKPSSSKSSVNGPKNSSDKQSS
SHSSSSDKTPHKHSSCKSSSTSSSSSSKNKSSEKESSKKPSSSSSSHQNHEHSKQSSHSK
SKHETNTSKHEKSSSKTEKSSVKHEHHKHSSDTTSKHDHKKHDSVSKSSKEGHRNSTEKE
RKKRDRSVSLDSNGSRRKIVNLNVDLFGEDSDGGPSLFSDEEEDPYEECLRIYNESNVSR
PSPKKQHNEMKLNDADQSESMQIPGKKRTAHIGSKEVTRKIPKKPNSKLSPAQIMHNRFV
QMQKQAQEEAGRSQEPSTSSASHSKQRVAHHSKQAGQGTKIVDGKTVITTVSKTQKRTAH
VPNVKNLKRPTIPAEYGSKVPISVRQRYLNTIIDECLPLYQKEEDAFKRGLEEELSVYKR
ASNKNVYLNVACNTIKRLRTETAEFCSSPTKPTSPQKMSHEAMLGGKNATKTTYTLNRSG
GSYRGPMENFKGSELCNRLSRYILTEEQLQENGYPRPDPENSSAAKVYTTSQQEQNSAKL
KTYEKICVRCGKRFMVYPNGTYAHKEECIHHWGKAWKKKIAGYIETRYTCCQGDLGAEGC
QVAKYHVHESNKWENRMGYLRTFPCSPVPDGDYGVYAMDCEMVYTQGGQELARVTVTDCE
NNSVYETLVRPDRKVIDYNTRFSGITAEDMDGVTTTIRDVQAVLLSLFTEKTILIGHSLE
SDLVAVKIIHDTVVDTAVVFPHRLGPPYKRALKTLMAEYLKKIIQDDVGGHDSQEDAISC
MELMQWRVKEDARKEPRCS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgagtgggggttacttccgcggattcaactgtccattttttgccagtggtctt
tgtgaacgcccgtattgccactaccgacatgtaaagacggaggaagaaaaaccacaaagt
aaagcagcagctgggtactctgatgcacaatatgaagtgaattggaatcctgggaaaaat
tcaagtggttccttgggtgaacatgtcaaattaaacaagtatactggagaacctgaaatt
tcaattgatccaaagacagcagacaaagaaactccaccagaagaatttgagaatgtcaac
aaatatacaggagaaccaatccttaccccagaaacaaatgaatatattgtagaagtgaaa
actaattgtcaaaattacaaaccaacagataaaaaatctttgaagtctcggagaccaaaa
ttgaacataccaaaacctgttcaaaaggtgaacaagtatactggtgaaccagttgttgaa
agtgttgaaaaacaagcatacacaccagaagccagggatttccctgaatataatcctact
cctatcaatcagctaaaacctagtccaccaaaatataaaactgacattttagataatgag
aatgagcaagagtacgacccacagagtaacttttctaccacaagtttacttaagccttct
cagcccctggccataaaaaggtcatttacgtatgatccaaccacacctgactttcaccat
cctgccaagaaagctaaagaagaacaagaggtcccagtgtctgataatgaggacaaaagc
gatgatggagagttgggaatgttcagtgaagatgaagaagaaatgatatctgaatcgagg
gaagatgatgtagatacaatagacaatgaggaagaaaactcatcaaagccctcgatgatt
acagatgtcaaagtgtttgaaagtttacttatgccagttatggatcatgatgatagcaat
gatagattaagtgatacagaaaagactttatcagactcaaagaaaaaatttaatgaaaaa
acaaaacatgccaaaaaatcaaaaactagtgataaaacttcagatcacagtaaaaaatca
tcaaacagttcaatacaaagaaatgggcattcttcaaaggagaaggtgtcaaaagcagaa
tcttcaaaatcttctaaatcaagttcatcctcaaaatcaagagaacagtcatcatccaag
ccatcttccagtaaatcctcagtgaatggtcccaaaaattcatcagacaaacaaagttcc
tctcattcatcctcctctgataaaacacctcacaagcattctagttgcaaatcctcatct
acttcatcatcctcttcctctaaaaataagtcatctgaaaaagaatcatccaaaaagccc
agttcctcctcatcttcacatcagaatcacgaacacagcaagcagtcatcacatagtaaa
agcaaacatgaaacaaacactagtaaacatgaaaaaagttctagcaaaactgagaaaagt
tctgtcaaacatgagcatcataaacattcatcagatacaacatcaaaacatgaccataaa
aaacatgattctgtgtccaaaagttccaaagaaggccacaggaactctacagagaaagag
agaaagaaaagagatagatcagtttcattagacagcaatggatctaggcgaaagatagta
aacctgaatgtggatctgtttggagaagacagtgatgggggtccttcactttttagcgat
gaggaggaagatccgtatgaagagtgtcttcggatttacaatgagagcaatgtttctaga
ccatcacccaaaaaacaacataatgagatgaaattgaatgatgcagaccagagtgaaagc
atgcaaataccagggaagaagaggactgctcacataggaagcaaagaggttacaagaaag
atcccaaaaaagcccaacagcaaactatctccagctcaaatcatgcacaaccgttttgtt
caaatgcaaaagcaggcacaagaggaggctggaagatctcaggaaccatcaacttcatca
gccagccattcaaaacagagggttgcccatcatagtaagcaggcaggacaggggaccaag
atagtagatggcaaaacagtcatcactacagtgtctaaaacccagaaacgtacagctcat
gtacccaatgtgaaaaacttgaagcgacctacaattccagcagaatatggcagcaaggtc
ccaatcagtgtgagacaaagatacttaaacaccattattgatgaatgtctacctctctat
caaaaggaagaagatgcatttaaaagaggtctggaggaagaactctctgtgtataaaaga
gcaagcaacaaaaatgtgtacctcaatgtggcatgtaacacgatcaaacgacttcgaact
gagacagctgaattttgttcatcgccaacaaagcccacttctcctcagaaaatgtcccat
gaagcaatgttgggtgggaaaaatgccactaaaaccacttataccctcaacaggtcagga
ggctcttacagggggcctatggaaaattttaaaggttctgaactttgcaatcgattgtcg
agatacatactgacagaggaacaacttcaggagaatggttatccccgaccagacccagag
aacagctctgcagcaaaggtgtacactaccagtcaacaggagcagaatagtgccaaactg
aaaacatatgaaaaaatctgtgttcgatgtggaaagcgcttcatggtttacccaaatgga
acatatgcccacaaagaagagtgtattcaccactggggaaaagcatggaagaagaaaatt
gctggatacattgaaactagatatacatgttgtcagggagatttgggggcagaaggatgc
caagttgcaaagtaccatgtgcatgaaagcaataagtgggagaaccgcatggggtacctg
cggacctttccatgttcccccgtacctgacggtgactatggagtgtatgccatggactgt
gagatggtttatacacaaggtgggcaggaacttgctcgtgtaacagtgacggactgtgag
aacaactcggtgtacgagaccttagtgagaccagacagaaaagtcattgattacaacacc
agatttagtgggattactgcagaggatatggatggtgtgactaccactatcagggatgtc
caggcagtgttacttagtctgttcacagagaaaacgattcttattggtcatagtctggaa
agtgaccttgtagctgtcaagataatccatgacacagtggttgacactgcagtggtgttc
ccacatcgtctcggaccaccctacaaaagggccctcaaaacactgatggcggagtatctc
aaaaagattattcaagatgatgttggcggccatgacagtcaggaggacgcgatatcttgc
atggagttgatgcagtggcgagttaaagaggatgctcgcaaggaaccacgatgtagctga
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integrated database retrieval system
