Magallana angulata (Portugese oyster): 128165222
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Entry
128165222 CDS
T09348
Name
(RefSeq) ATP-dependent RNA helicase DDX50-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128165222
03036 Chromosome and associated proteins [BR:
canu03036
]
128165222
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128165222
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128165222
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128165222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
128165222
NCBI-ProteinID:
XP_052685472
LinkDB
All DBs
Position
10:44221732..44240084
Genome browser
AA seq
774 aa
AA seq
DB search
MVKVKVEDTKEEPVPKVKTGKGKISKDKKKKDKTSVQDDKKKSKKDPKVTKSEENEEATV
TKEKKKSKKKPELAENGEKEEGTDIKEKKKKDKTKADKSEEMTDISEDSVVKEKKKSKKD
KTSSANGHSVTEEADTTENVNGTTKNPEETKNGAEVSEKTEAEILGDFSNFRLSDVTVEK
LKKRNVNYLFPIQYKTFDHVYNGEDVIGQARTGTGKTLSFALPLVEILQKNKTPRIRNCP
KVIAMVPTRELAKQVSDEFESISDGLSVACFYGGTPYEKQIRAIRSGIDVLVGTPGRIKD
HIEKGNLDFKGVRHVVLDEVDRMLDMGFAEDVETIISSAYNNGSGENPQTLLFSATLPSW
VHDTARKYMNKDKLAKVTLVNSQENRTSTTVQHLAIRSSFWDRPSVIGDVLQVYSGKNGR
AIIFNETKKEADNLSCSEYIKQDAHVLHGDIPQEKRETVLKSFREGKFNVLLTTDVAARG
LDIPEVDLVIQCNPPEDVDSYIHRSGRTGRAGKNGVCICFYKPEEEMKLANVEYRAKIKF
KKVSGPTKEDIISASVEDAVRSIEGVQSETLDYFRSSAKELIAERGAEDALAAALALISG
STKITSRSMLSSKEGFTTFYLKTNTEIQRNNYVYRALERCLPKDLVEKIRWLTLCKDRMG
AVFDFPSECESQVLNYWTDGKFDTLCKATELPELQEKERPFSPGARGGRGRGSFGGRSRD
FSSYNNRSRGGFGGRGSFGGRGGFGGRGSFGGRGGFKRSGDFGEASPQNKKIRF
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggtaaaggtagaagataccaaagaggaaccggtaccaaaagttaaaacgggc
aagggaaagatttcaaaagacaagaagaaaaaggacaaaaccagtgtacaggatgacaag
aagaaatctaagaaagatccgaaagtcacaaagagtgaagaaaatgaagaagcaacagta
accaaagagaaaaagaaatctaaaaagaaacctgaactagcagaaaatggagagaaagaa
gaaggaacagatatcaaagagaaaaagaagaaggacaagacaaaagctgacaaatctgaa
gaaatgacagacatatcagaagacagtgtagttaaagagaaaaagaaatcaaagaaagac
aaaacatcatcggctaatggccacagtgtgacagaggaagcagataccactgaaaatgtc
aatggtacaactaaaaatccggaggagaccaagaatggtgcagaggtgtctgaaaaaaca
gaggcagagatcctgggggatttctcaaacttcagattatcagatgtcactgtggaaaaa
ctcaagaagcgaaatgtgaactatttgtttcccatacaatacaagacatttgatcatgtc
tacaatggagaagatgtaattggtcaagcacgtactggtactgggaaaacactttcattt
gcattgccgttggtagaaattctgcagaagaataaaaccccaagaattcgcaactgtcca
aaggtcattgcaatggtaccaactcgtgaacttgcaaagcaagtttctgatgagtttgag
tctattagtgatggactcagtgtggcctgtttctatgggggaactccatatgaaaagcaa
ataagagccataaggtcagggatcgatgttctggtgggaaccccagggcgtatcaaagat
cacatagagaagggtaaccttgacttcaaaggggtgcggcacgtggtcctggatgaggtg
gatagaatgctggacatggggttcgcagaagacgtggaaactatcatatcatccgcctat
aataacggaagtggagaaaacccccagacactgttgttttcagccacacttccttcttgg
gttcacgacacggccagaaaatacatgaacaaagataagctggctaaggtcaccctggtc
aacagtcaggagaaccggacatccaccacagtacagcatttggcgattcgaagcagtttc
tgggatcgtccctctgtgattggtgatgtgcttcaggtttacagtggcaaaaatggcaga
gcgatcatatttaatgagaccaagaaagaggcagacaacctatcgtgtagtgaatacata
aagcaggacgctcacgtattacacggagacattccacaagaaaagagggaaacggtcctc
aagagtttcagagaagggaagtttaacgtgctgttgacgacggacgtggcagcgcgagga
ctggacattccagaagtggatctggtcattcagtgtaatccgcctgaggacgtcgactct
tacatccaccgctccggccgaacaggcagggccgggaaaaacggagtctgcatctgcttc
tacaaaccagaagaagagatgaaattagccaatgtcgagtacagagcaaaaatcaagttc
aagaaagtgtctggaccaaccaaggaagacataatcagtgcctctgtagaggatgcagtg
agatctatagaaggtgtgcagtctgagacattggattatttccggtcgtcggcaaaggaa
ctgattgctgagcgcggagcagaggatgctttggctgctgccctcgcgttgatatcagga
tccacaaaaatcacctcccgctccatgctctcctcaaaagagggttttacaacgttttat
ttgaaaacgaacacggagatacagcgcaacaattacgtgtaccgggccctggagaggtgt
ctacccaaggacctggtggagaagatccgatggctgaccctgtgtaaggacagaatggga
gctgtgtttgattttccctcggagtgtgaatctcaggtcttgaattattggaccgacggg
aaatttgataccctgtgcaaggccacagaactgcctgaattacaggaaaaagaaagaccc
ttctccccaggggcccgtggcggcagggggagggggtcgtttggggggcgcagcagagac
ttttccagttacaacaacagatctagagggggttttggcgggagggggagttttggcggt
agagggggctttggggggagagggagctttggtggcagaggagggttcaaaagatcaggt
gactttggtgaagcaagtccgcaaaacaagaaaattcgtttttag
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