Magallana angulata (Portugese oyster): 128165249
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Entry
128165249 CDS
T09348
Name
(RefSeq) RNA helicase aquarius-like isoform X1
KO
K12874
intron-binding protein aquarius
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128165249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128165249
Spliceosome [BR:
canu03041
]
Complex B
Other components
Prp19-related factors
128165249
Complex C
128165249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
RecA_N
SLFN-g3_helicase
AAA
AAA_16
UvrD_C_2
DnaB_C
AAA_22
PhoH
NB-ARC
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
128165249
NCBI-ProteinID:
XP_052685581
LinkDB
All DBs
Position
10:complement(29472145..29536791)
Genome browser
AA seq
1414 aa
AA seq
DB search
MSAPTESDKTKRRNKNLTVEQIQEDSITQLASQHWSKQALENGVPFKTEIVEKVFKEELL
ASKFSTKRTMLLEFSQYLENYLWPNFTKEKGHAHIMSIVLMVNEKFRERVPPWESFKQHP
EHFSDFSLRALETCLEEGTSLRELSILLIFLIHCFNSLEVDLIREQIQKLVSLPIWSNIL
QGKRDEIFRNNPKYKKFFNLIKKNDAKLSEDQMKRVTFERGFLYHMIKKFLGVLDTVPLK
GEVPFSKINFCERFLELMIDIEAQLPTRRFFNVLLEDCHLVVKCQLSNLCKRSEGKLFGQ
LLEMLSSYTEFEIDDITGEALTLHNRIDIHYDRVLKLQKVAFKHFPDLQRFAIANVASVD
TRAALTKYFKSLSPVELHKILAYIHQLPPVEKEEDCISDADYLLELLISRHEKRKSQQER
VNEMPLYPTEKIIWDENIVPVEYFSGEGCLALPKLNLQFLTLHDYLLKNFDLFRLESTYE
IRQDIEDAGSHLKPWQSEDGSCLFGGWARMAQPIVGFNVVEVAKPRVGESHPAQVRADVT
VNLSVRPQVKKEWEDLRKHDVAFLITLRPTVPIHHKYNFREPFIPQVGLTYVRGCEVEGM
LDMEGKVIEDGPEPKPYLYGDTRTFRVWLDPNQYQQDMTSNMDGDEDVYETFNVIMRRKP
KENNFKAVLETIRDLMNTECVVPDWLHDLILGYGQPDAAHYSKMSNTIETLDWNDTFLNI
DHLKASFPGHEFEITTEDVSKCIPPFRLTFTKQQEPATGKRKAAEEEPTPSKKVIIQPHF
IENRGPYPYNQPKKNQIPFTPTQIEAIRSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHN
FPDQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFSRYGRVNYVLA
QRLELLEEVARLQSSLDVKGDMSYTCETAGYFYLYQVLARWEEYQSKLRNQKEKTVDIIK
DEFPFTKYFENAPQPIFKGRSYAEDMDMAEGCFRHIKKIFTQLEEFRAFELLRSGSDRAE
YLLIKEAKIIAMTCTHAALKRRDLVSIGFKFDNILMEESAQILEIETFIPLLLQNPEDNN
NRLKRWIMIGDHHQLPPVIKNMAFQKFCNMEQSLFTRLVRLGVPTVDLDAQGRARPGIAS
LYNWRYKKLGSLSHVMVHPEYKKANAGFVFDYQLIDVQDFNGVGESEPNPFFYQNLGEAE
YVVATFMYMRLLGYPAEKISILTTYNGQKHLIRDVIKQRCGRNQFIGTPHKVTTVDRYQG
QQNDYILLSLVRTKTVGHLRDVRRLVVAMSRARLGLYVFGRVSLFSNCFELTPTFNKLMA
RPLQLHIVPSEVYPPSRKMNEPIKGEAMIMKNMPHMAQFVYDFYNQKINRLMSQHEGGRQ
TKAEPLETPPITEEKKEESLETEPVESQDTKMEG
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaccgactgaaagtgacaagaccaagagacggaacaaaaacctgacagtagaa
cagatccaggaggacagcataacacagcttgcaagtcaacactggtcaaaacaagctttg
gaaaatggggttccatttaaaacagagattgttgaaaaggttttcaaagaagagctgctg
gcctcaaagttttcaacaaaaagaactatgttactagaattcagccagtaccttgaaaat
tacttatggccaaattttacaaaagaaaagggacatgcacacataatgtcaattgtattg
atggtgaatgaaaagttcagggaaagagtaccaccttgggaatccttcaaacaacaccca
gagcatttcagtgatttcagtctcagggccttggaaacctgtcttgaagagggtacatca
ctcagagagttgtccatccttcttatcttcctcattcactgtttcaacagtttggaagtg
gaccttattcgtgagcagattcagaaactagtttctctacctatatggagcaatattttg
cagggaaagagggatgaaattttcagaaacaatccaaagtacaaaaaattcttcaacctg
atcaagaagaacgatgccaagctgtcggaggatcagatgaagagggtgacgtttgagagg
ggcttcctctaccacatgatcaaaaaattcctcggagtactggacactgttccactgaaa
ggtgaagttccattctccaagataaatttctgtgagcgcttccttgagttgatgattgac
atcgaagctcagcttcccacacgacgattcttcaatgttctcctggaagactgccacctg
gtggtcaaatgtcagctctccaatctgtgtaagcggtcagagggcaagctgtttggacag
ttactggaaatgttgagcagttacacagaatttgaaattgatgacatcacaggcgaggcc
ctgacactgcacaacagaattgacatccattatgacagagtcctgaagctgcagaaagtg
gctttcaagcacttcccagacctgcaaaggtttgccattgccaatgtagccagcgtggac
actagagcagctctgacaaagtactttaaatctctaagtcccgtagaacttcacaagatc
ttagcatacatccaccagttgcccccggtggagaaagaagaggactgtatatcagatgcg
gactacctgctggagctgttgatctccagacacgaaaaacgcaagtctcagcaggagagg
gtgaacgagatgcccctctaccccacggagaagatcatctgggacgaaaatatcgtacct
gtagagtacttctctggagaaggttgtttggctttgcctaagctcaatctgcagtttctg
actctccatgactatttgttgaaaaactttgatcttttccgactggaatctacatatgaa
attcggcaagacatagaggatgcaggatcacatcttaaaccttggcagtcagaagatggc
agctgtttgtttgggggatgggccagaatggctcagccaattgttggattcaatgttgtg
gaggttgccaaacctcgtgtcggagaatctcatcctgcacaagtgagagcagacgtcaca
gtcaatctgagtgtccgacctcaggttaaaaaagaatgggaagatctaagaaagcatgac
gttgccttcctgatcactctgagacccacagtcccgatccaccacaagtacaacttccgg
gagccgttcatcccccaggtggggctgacctatgtgcggggctgtgaggtggagggcatg
ctggatatggagggcaaggtcattgaggatggaccagaaccaaagccctatctttatgga
gacacccggacgttccgagtctggctggatcccaaccagtaccaacaggatatgaccagt
aacatggatggtgacgaggatgtgtatgagaccttcaatgtcatcatgaggagaaagcca
aaggagaacaactttaaggctgtcctggaaactatccgagacctgatgaacacggagtgt
gtggtaccagactggttacacgacctcattctgggctacggacagccagatgctgcccac
tactcaaaaatgagtaacacgattgagaccttggactggaacgataccttcctgaacatt
gatcatctgaaggccagctttccaggacacgagtttgagattacaacagaagatgtcagc
aaatgcatcccaccatttaggttgacatttacaaagcagcaggaaccagcaacagggaag
aggaaggcagcagaggaggaaccaacgccctccaaaaaagtcatcatacaaccccacttc
atcgaaaacaggggtccatacccatacaaccagcccaaaaaaaatcagattccgttcacc
cccacccaaattgaggccatacggtcaggcatgcagccaggtctgaccatggtagttgga
cccccggggacgggtaaaacagacgtcgccgtacagatcatctcaaacatctaccacaac
ttccccgaccagcgcacacttattgtcacacactctaatcaggccttaaatcagctcttt
gagaaaatcatggcccttgacatcgatgagcggcatttgcttcgtcttggtcatggagag
gaagccctagagactgagaaagattttagcagatatgggcgtgtgaattatgtccttgcc
cagcgtctggaactcctagaggaggtggccaggctacagagtagtctagatgtcaagggg
gacatgtcgtacacatgtgaaacagctggatacttctacttgtatcaggtgttagcaaga
tgggaagaatatcagagtaaactcagaaatcaaaaggaaaagacagttgatatcatcaaa
gatgagtttccctttaccaaatattttgagaatgcccctcagccaatatttaaaggaaga
tcttacgccgaagatatggacatggcagagggctgctttagacacatcaagaaaatcttc
actcagctcgaagagttccgagcctttgagctgttgaggagtggatcggatcgagctgag
tatctgttgattaaggaggccaagattattgcaatgacgtgtactcacgcagccctcaaa
aggagggacctagtgtctatcggattcaagtttgacaacattttgatggaagagtcagca
cagatccttgaaatagaaactttcatcccattattgctacagaaccccgaggacaacaac
aatcgtctgaagcgctggatcatgattggagaccatcaccagctcccccctgtcatcaag
aacatggcattccagaagttctgtaacatggagcagtccctcttcacacgtctggtcagg
ctgggagttccaactgttgaccttgatgctcaaggtcgagcaagaccagggatagccagt
ttatacaactggagatacaagaaactgggcagtctctctcacgtcatggtgcatcccgag
tacaagaaggctaatgcagggtttgtgtttgactatcaactgatagatgtccaggacttt
aacggcgtgggcgaatcagaacccaacccattcttctatcagaatttgggggaagctgag
tatgttgtagctaccttcatgtatatgcggcttcttggttatcctgctgagaagatctcc
atcttaacgacctataacggtcagaaacacctgatcagggacgtgatcaaacagcgatgt
ggcaggaatcagttcattgggacaccacacaaggtgactacagtagatcgttaccaaggt
cagcagaatgattacatccttctctcactcgtcagaacaaagacagttggacatttaaga
gacgtgagaagattggtggtggccatgtcccgagccagactgggactgtacgtgtttggc
agggtctctctgttcagtaattgttttgagctcactccaacgtttaacaagttgatggcc
agacccttacaacttcacattgtgccatcagaagtttatccaccttccaggaagatgaat
gaaccaatcaaaggagaagcaatgattatgaaaaacatgccccacatggctcagtttgtg
tacgacttctacaaccagaaaatcaacagactgatgtcacagcacgaaggagggaggcag
acaaaggctgaacctttagagacaccgcctataactgaagagaaaaaggaagaatcactg
gaaaccgaaccagtggaatcacaggacaccaaaatggaaggatga
DBGET
integrated database retrieval system
