Magallana angulata (Portugese oyster): 128165369
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Entry
128165369 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128165369
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128165369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128165369
03400 DNA repair and recombination proteins [BR:
canu03400
]
128165369
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128165369
Messenger RNA biogenesis [BR:
canu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128165369
DNA repair and recombination proteins [BR:
canu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128165369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
128165369
NCBI-ProteinID:
XP_052685758
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All DBs
Position
1:complement(22529701..22531808)
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AA seq
524 aa
AA seq
DB search
MAAISVKISEIQNFFQIQLTENQIRGIKGLAAGQDVFVGTRTGSGKSLIYESCPIIFGES
SVCVVISPLLSIMKEQVNRLSGLGLKATYIGKKDCCIDDVTRGYYQFVFGNPEVLVGNDK
WRGIFRHPEFSQRHKLTVIDEAHTVYQWGEKKDSDDAFREHFSKIGELRSLSLNIPLLSL
TATASPSNRKRILKSLCFRDNHIVIIDSPDRPNIKINVKCVKNNSDISDIFSWVIDELNS
RKKNAQRIVIFCESIKDCAVLYTMFRRKCDASLVQMFHSKTAEHIKEKIRIDMESEDGQI
RVLISTNAAGMGVNFKGLHNVVHYGPPRDLDTLVQQMGRAGRDGEFSVELILYKNHKGHL
KKIDSDVLSLIKSEDQCRRNILCKAYNAHSHIFEHLHECCDFCEKTCKCLDCPRLSHPVF
NAIEPQEEDAFQRDVTDENKITLKHKLELLQSNLPKLFGNNSELSVETIKCITDNCHRIF
TTSDVMEYGTIWLLDTAEQVIKIFDDVFDDIIIYGSSDSENDFT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatcagtgtaaaaatatcggagatacagaacttttttcagatccaactgaca
gaaaatcaaattcgtgggataaagggcttagcggctggccaggacgttttcgtaggcaca
cggacgggaagtggaaaatctttaatttacgaaagttgtccaattatctttggcgagtcg
agtgtgtgtgtggtaatatccccacttctcagcatcatgaaagagcaggtgaatagacta
tctggtctaggtttgaaagcaacatatattgggaaaaaagattgctgtatagacgacgtt
acgaggggatattatcagtttgtctttggaaatcctgaagtgctggttggaaacgacaaa
tggagaggaatatttcgacatcccgaattttctcaacgacacaagttgacagttattgat
gaggcacacacagtttatcaatggggcgagaaaaaggattctgatgatgccttcagggaa
catttctcaaagatcggcgagttgaggtccctcagtttgaacattccactactctctctt
acagcaaccgcaagtccgtcaaataggaaacgaatcctgaaaagtttatgtttccgtgat
aatcacattgtaataattgacagtcctgacagaccaaacatcaagattaatgttaaatgt
gtaaaaaataattctgacattagtgacatattttcatgggttattgacgaactcaactca
aggaaaaaaaatgcacaaagaattgtgatattctgtgaaagcattaaagactgcgccgtt
ctctacaccatgttcagacggaaatgtgatgcttctttagtacaaatgttccacagcaaa
accgcagagcacatcaaggaaaaaattcgcattgatatggagtcagaagatggccaaatt
agggtccttattagtacaaatgctgcaggaatgggagtgaactttaaaggcctgcataat
gttgttcactatggacctccacgtgaccttgacacactagtacagcaaatgggcagggca
ggaagagatggtgaattctctgttgaattaattttatacaaaaatcataagggacattta
aaaaaaatagacagcgacgttctttcattgataaaatcagaggatcagtgccgaagaaac
attttgtgtaaagcatacaacgctcattcacacatttttgaacacttgcatgaatgttgt
gatttttgtgaaaagacctgcaaatgcttagactgtcctaggctatctcatcctgtattt
aatgcaattgagccacaggaagaggacgcatttcaacgtgatgtgactgatgagaataag
ataactctcaaacataaactagaacttttacaaagtaatctacctaagttatttggcaac
aattcggaactaagtgtagaaactattaagtgtattactgacaattgtcacagaatattt
acaacaagcgatgtgatggaatatggaacaatctggctgctcgacactgctgaacaagtg
attaagatttttgatgatgtatttgatgatattataatatatggttcatcagactctgaa
aacgacttcacttga
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