Magallana angulata (Portugese oyster): 128165558
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Entry
128165558 CDS
T09348
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128165558
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128165558
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128165558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
128165558
NCBI-ProteinID:
XP_052686180
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All DBs
Position
1:complement(22681026..22693027)
Genome browser
AA seq
884 aa
AA seq
DB search
MTKWRKKRLDQQNHESKTQTFKSEKRKTKSTKLKPNGKNDNTNRACDVKNKKAVKQKVER
KYSKGNKRGSFVEDNDEMEVVGQKHLQQIFIPDKEDADSDSSQELQDTRKWLTEQNRKKK
KSGGFQSMGLSHGVYKGVLRKGYKIPTPIQRKTVPLIMEGKDVVAMARTGSGKTAAFLIP
MFEKLKTHTAKSGARGLILSPTRELALQTLKFTKELGKYTGLRAAVVLGGDKMDDQFAAL
HENPDIIIATPGRLMHVLVEMEKKLKSVEYVVFDEADRLFEMGFQEQLHEIIHRLPESRQ
TVLFSATLPKLLVDFAKAGLHDPTLLRLDVETKLSEQLKQSFFRCREEDKPAILLYILKH
VIDLDQLTVVFAATKHHVEYLHMILTYAGIDSTYIYSSLDPSARKINVAKFQHKKVKVLI
VTDLAARGIDIPLLDNVINVNFPAKSKLFVHRVGRVARAGREGYAYSLVAQDEVPFLLDL
YIFLGRSLTIASQLKNVEDKDGVLGDVPQTVVDEEEEQLRLWHKDHIDLINMKKVVGNAQ
KKYLRSRPLPAKESIKRYKQIQSTDNIGLHPVFAKECSTEEQQKNELLNALKAYKGHSTI
FETNTSSKNRSFDVMKHKRAFHQTVIQKKTKQVTDLKDAESDDSDRGETEQPMADEENVK
ETFRTVIGGKRKANNKLFDPQRKKKRKQESIRDEENYLHYRPKDFQSELGLSLGTSFDKE
ATGAVLDLRDEINKSKPMSNKRWDRKKKKFVTTNDNADGKKKIRTESGAMISASYKSRAY
KDWLNKNKMANANDSGDEEEERETNTGNQDNSYRLKVIGTKRRNWHTKLKEEEDQKRNRT
ELKHKEEILKQRKIKAKKQAFQNHRQKQRQSRQKFKVQKSRKKH
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtggagaaagaaaagattagatcaacaaaatcatgaaagtaaaactcaaact
tttaaatctgaaaagagaaagaccaaatcgacgaaattgaaacctaatggcaaaaatgat
aacactaacagagcatgtgatgtgaaaaataaaaaggctgtcaaacagaaggtcgagagg
aagtattcaaagggtaacaagcgtggttcttttgtggaggataatgatgaaatggaagtt
gttggtcaaaaacatctgcaacaaatctttataccggacaaagaagacgcagactctgac
tccagccaagagcttcaggatactagaaaatggttgacagaacagaacagaaaaaagaag
aaatctggaggatttcaatcaatgggtttgtctcatggagtttataagggggtgttgaga
aaaggatacaaaatacctactcccatacaaagaaagactgtacctttgattatggaagga
aaagatgttgttgctatggctagaactggaagtggaaaaactgcagcttttctaattcca
atgtttgaaaaactcaaaacacacactgctaagtctggggccagaggtcttattctatcc
cctactcgagaattagcattacagactctaaaattcaccaaagagctgggaaaatataca
gggctgagagcggcagtggttttaggaggagacaagatggatgaccagtttgctgcactt
cacgaaaaccctgatataatcatagccacacctggtcgtttaatgcacgtcttagtggag
atggaaaagaaactgaaatctgtggagtacgtggtctttgacgaggcagacaggctattt
gagatgggatttcaagagcaattgcacgagataattcacaggctgcctgagtccagacaa
acagttttgttctctgctactctgccaaagctactggtagactttgctaaagctggactt
catgacccaacactgttaaggctggatgtggaaaccaaacttagtgagcagctgaagcaa
tcctttttccgatgccgtgaggaggacaaaccagccattttgctttatattctcaagcat
gtcattgacttagatcagctaactgttgtatttgctgcgacgaagcatcatgtggaatat
cttcatatgatattgacatatgctgggatagattctacttacatctatagctcgctagac
ccctctgctcgtaaaatcaatgtagcaaagtttcaacacaagaaagtgaaggttctcata
gtgactgacctcgctgcccgtggaatcgacatccctctgctggacaatgtcataaatgtc
aacttcccggccaagtccaagctctttgtgcacagagtgggtcgtgttgcccgggctggc
agggaggggtacgcctattctctggtggcccaggatgaggtgcctttcctcctggattta
tacatctttttagggagatccctaactattgcctcacagcttaaaaatgtagaagacaag
gacggggttctgggagatgttccacagacagtggttgatgaagaggaagaacagctcagg
ctctggcacaaggatcatattgatttgataaacatgaaaaaagttgttggaaatgcccaa
aagaaatacctgaggtctcggcctctcccggccaaggagtccattaaacgctacaaacag
atccagtctacggataacattggattgcaccctgtgtttgcaaaagagtgcagtacggaa
gaacagcagaagaatgagttattaaatgcattgaaggcatataaagggcactcaacaatt
tttgaaacaaatacatcaagcaaaaacaggagctttgatgtgatgaaacataagagagcc
ttccatcaaacagtcatccaaaagaagacgaagcaggtgacagacttgaaggatgcagaa
tcagacgacagtgatagaggggaaacagagcagccgatggctgatgaagaaaatgtcaag
gaaacatttcgaacagtcattggaggaaaaagaaaagccaataacaaattgtttgatccc
cagaggaaaaagaaacgcaaacaggagagtataagagatgaagaaaactaccttcactat
cgtcccaaagacttccagtctgaactcggattaagcttaggaacttcctttgacaaagaa
gcgacaggagctgtgttagacttgcgagatgagattaataaatctaaacccatgtcaaac
aagaggtgggacagaaaaaagaaaaagtttgtcacaaccaatgacaatgcagatggcaag
aaaaagatcagaacagagagtggggctatgatatcagcttcctataaatctcgtgcttac
aaagattggttaaacaaaaacaaaatggcaaatgccaatgacagtggagatgaagaggaa
gaacgtgaaactaacactggtaaccaagacaacagctacaggttaaaggtcattggaacc
aagcgaagaaactggcatacaaaactcaaagaggaagaagaccagaagagaaatcggaca
gagctgaagcacaaggaggaaatcctcaagcagcggaaaatcaaagccaagaaacaagct
ttccaaaatcatcgacagaaacagaggcagtcgcgtcagaaatttaaagttcaaaaatcc
agaaagaaacactga
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