Magallana angulata (Portugese oyster): 128165634
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Entry
128165634 CDS
T09348
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03420
Nucleotide excision repair
canu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128165634
09124 Replication and repair
03420 Nucleotide excision repair
128165634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
canu03051
]
128165634
03400 DNA repair and recombination proteins [BR:
canu03400
]
128165634
Proteasome [BR:
canu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
128165634
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128165634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
UBA_RAD5A
Thioredoxin_13
DUF2604
DUF1421
CUE
Motif
Other DBs
NCBI-GeneID:
128165634
NCBI-ProteinID:
XP_052686319
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Position
10:15272777..15281942
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AA seq
387 aa
AA seq
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MFVTLKTLQQQTFKIEIDPEDLVKSLKEKIENEKGKEHFPAGGQKLIYAGKILDDEKKIG
EYKIEEKNFVVVMVTKPKPAAAKPAEPSPAPPVATPAPAPAATEAPKPAEEKKEEKMETT
QSETKTEAPPASTTSTSTATTETSGSEASGQVSAESMLVTGQEYENMVMEIMSMGFERDQ
VIRALRASFNNPNRAVEYLFQGIPDTPEPEPPTGAPVAPEQTTQQTSPASNPPATGGGSL
SMPAAGQTGGEDPLSFLRSQPQFQRMRQLIQDNPNFLPELLRQIGQSNPPLLQMISQNQE
RFIQMLNEPAEGGDVSDQAQGGGLPSAGAPPGSGIIQVTPSEKEAIERLKALGFSEGMCI
QAYFACERNEDLAANFLLSQTEDDQQS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcacgctgaaaactttacaacaacagaccttcaaaattgaaattgacccagaa
gacttggtcaaaagtttgaaagaaaaaatagaaaatgaaaagggaaaagaacattttcct
gctggaggacagaagttgatctatgcaggaaagattctcgatgatgaaaagaaaataggc
gaatacaaaattgaagagaaaaactttgtagtagtaatggtgacaaagcccaaaccagca
gcagccaaacctgctgagccgagccccgcccctcctgtagccaccccggccccagcccct
gctgcaacggaggcccctaaaccagccgaggagaagaaggaggagaaaatggaaactaca
caaagtgagacaaaaacggaggctccccctgcctccaccaccagtacctccacagctacc
acagagacctcgggctcagaggcctcgggccaggtgtctgccgagagcatgctggtcacc
ggccaggagtacgagaacatggtgatggagatcatgtccatggggttcgagcgagaccag
gtgattcgagcactgagagccagctttaacaatccaaacagagccgtcgagtatctgttc
cagggaatccctgacacaccagaaccggaaccacctacaggagcccctgtagccccggaa
cagaccactcaacagacctccccagcctccaatccccccgccacagggggtgggtcctta
tcaatgcccgcggcaggacagacaggaggagaggaccctttgtcgtttttaagaagtcag
ccacaatttcagagaatgagacaattgatacaagacaaccccaatttcttaccagaactc
ctccgacagataggccagtctaatcctcctttattacagatgataagtcagaatcaagaa
cgcttcatacagatgttgaacgaacctgcagagggaggggatgtatcggatcaggcccag
ggtggggggttaccttctgctggggcacctccagggagtggtattatacaagttacacct
tcagagaaagaggccatagagaggcttaaagctttaggattttcagagggaatgtgcata
caagcctattttgcctgtgaaaggaatgaagatttagctgcaaattttcttttatctcaa
acagaggatgatcagcaaagttga
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