Magallana angulata (Portugese oyster): 128165835
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Entry
128165835 CDS
T09348
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128165835
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
canu01002
]
128165835
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128165835
03036 Chromosome and associated proteins [BR:
canu03036
]
128165835
Peptidases and inhibitors [BR:
canu01002
]
Metallo peptidases
Family M1
128165835
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128165835
Coactivators
SAGA/TFTC/STAGA complex
128165835
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128165835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
FBA_2
SR-25
Adaptin_N
CCDC106
Motif
Other DBs
NCBI-GeneID:
128165835
NCBI-ProteinID:
XP_052686643
LinkDB
All DBs
Position
10:29576391..29595490
Genome browser
AA seq
1252 aa
AA seq
DB search
MKKEGKTDVSRPYKLAHQTLCIRAINLEKKSLIGYVELVIHPLRQDLKRVKINSKQCRIY
HVSINDQYEAKFLYNDPTLEICQGDAKQRNLDYFQHCHFSAMSAVDPDNGNGEITVRLPP
EMYLNIAELRPFRLCIEFSLENPKGGLHFVVPDLPGPAHENAAHVFTAGLNNCSRLWFPC
LDTYSEPCTWKIEVTVDNELTAVTCGDLIEVISTPDKKRKTFHYFLSIPTSAPNIGMAVG
PFEIHVDPNMHEVTHFCLPHLTEILKHTTNYIHQAFEFYEELLSSRYPYTCYKHVFVDEA
YVESTSYATMSVLSTNLLHSNRIIDQTISTRTVLAEAVAKQFFGTFIAMQTWSDAWLPMG
ISGYLCGLFIKKTFGNNEYRFRISNYLKDVQDYENRVGGIVLDPTKRDSNHHFSIKSPHT
VSPRYMEAFRSKCFLVMRMLEQRIGEQLLIQVVNKLVALATTGASQKVGANTWGNLLLST
SSFLKIISTVTGKDISPFLELWVSQSGCARFFGNFVFNRKRNVVELELKQDLGAKGALKY
VGPLTVTIQELDGSFNHNFKIEENKTKFDITCHSKCRRNKKKKIPLMTGEEVDMDLSAMD
ADSPVLWLRVDPDMNLLSHVTWEQPDYMWQYQLRYERDIVAQREAIRALENYPTAGTRRA
LTDILEDDHCFYRIRMEAAHCLAKVANSMVGVWAGPPAMMTIFRKMFGSHSCPAIIRQNN
FSNFQNYFLLKTIPNAMALLRNIHTICPPEVFKFIMELFKYNDNSRNKFSDNYYRAALVE
AVSKTVTPAITLMSTPGQGPTADNLSAETKQILEEITRYLNLEKLLPCYRHTVTVSCLSA
IRTLQKFGHLPSEVEFFKSYAQHGVFRDIRLAAIDAIVDFIKTESRPEDMYWILNLVETD
PDLYVRHYALQQLVLNPPFRRMETSALHTEGLVERLWKMMNCTFSYDSRLRCDAADVYFT
LYGRTRPSCLPIPDNMVVLSLKDRKNKMNPAYVPDEMEEMFDDEEEDEEVGMEEGESSQV
DTEADIDVTDIGGEEPSLKRKSPPPTELPPPLVLSIGSVPETCPLGIFNEDSASQSKRLK
LKMESETLEEPQVTEPSKASGTQEVTVTKTPVTPSSATSAYAAEFLKFVGVKQEHPAPEP
QLSVTMDTSSRLSEGSSSPTTTAVGSESSAPLSFAGLLPSSTSATDMSSATDSKAHKAKK
KKKKNKHKHKHKHKHDRPDKDPLGRIREGSFNSSENSPSVTQTTLSSPEFEI
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaaggcaagacagacgtctcaaggccatataaattggctcatcagacttta
tgcattcgtgcaataaacttggagaagaaatcattgattggttatgttgagcttgtgatt
catcccctgcgacaagatttaaagagagtgaagataaatagcaagcagtgccgaatatat
catgtgtcaataaacgatcagtatgaggcaaagtttctgtacaatgacccaacactggaa
atctgccagggagatgcaaaacagagaaatctggattactttcaacactgccatttttcg
gccatgtcagcagtagaccctgacaatggaaatggagaaatcacagttcggttgccccca
gaaatgtacctgaatattgcggagttacgccccttccgcttgtgcattgagttttcatta
gagaaccctaaagggggtttacattttgttgtacctgatttacctggacctgcacatgaa
aacgcagcacatgtatttactgctggtctcaataactgctccagattatggtttccctgt
ctggacacctattcagagccctgcacctggaagattgaggtgacagtagacaatgaactg
acagcggtgacctgtggggacctcatcgaggtgatatcaactccagacaaaaagcggaag
acattccactacttcctgtctattcccacctccgctcccaacattggaatggcagttggg
ccatttgaaatccatgtggaccctaacatgcatgaagtgacccacttttgtttgccccac
ctgactgagattctgaaacatacaactaactacattcatcaggcctttgagttctatgag
gagctgctgtccagtagatacccgtacacctgttataaacatgtttttgtggacgaggcc
tatgtggagtctacgtcttatgccaccatgtctgttctgagtacaaacctgttacactcc
aacagaatcatagaccagaccatttcaacacgcaccgtcctggctgaggcagtcgccaaa
cagttctttggaacgttcatcgccatgcagacctggtcagatgcatggctgccgatggga
atctcaggatatctgtgtggtctctttatcaagaaaacattcggaaataatgaatacaga
ttcagaatttcaaattatttgaaagacgtccaagattatgagaacagagtgggaggaatt
gtgctagatcccacaaaacgagactccaatcatcatttctccatcaaaagcccccacacg
gtgtcccctcgttacatggaggccttccgatccaagtgtttcctggtgatgcggatgttg
gagcagaggattggtgaacagctgcttatccaggttgtcaacaagcttgtagctctggcc
acgactggggcttcacagaaggtgggggccaacacatgggggaacctgctgctctcaact
tcatcatttcttaaaatcatctcaacagtcacaggaaaagacattagccctttcctagaa
ttatgggtctcacagagtggatgcgccaggtttttcggaaactttgtgttcaacaggaaa
agaaatgtcgttgagctggagttgaaacaggacctcggagctaaaggggccctgaaatat
gtggggccactgacagtaaccattcaggaactagatgggtcgtttaatcacaactttaaa
atagaagaaaacaagaccaagtttgacatcacctgccattctaaatgcagaaggaacaag
aagaagaagattccgctgatgactggggaggaggtagacatggacctgagtgctatggat
gctgactcgcctgttctttggctacgagttgatcctgatatgaacttgttaagtcatgtg
acctgggaacaaccagactacatgtggcaataccagctcagatacgagagggacattgtc
gcccaaagagaagccatccgtgcactagagaactaccctacagcagggactaggcgggca
ctgacagacatactggaggatgaccactgcttctacaggatcaggatggaggcagctcat
tgtctggccaaggtggccaactctatggtgggtgtgtgggcaggacccccagctatgatg
accatctttaggaaaatgtttggatctcattcctgcccagccatcatcagacaaaacaac
ttctcaaactttcaaaattacttccttttgaagactataccaaatgccatggccctattg
agaaacattcataccatctgtccacctgaagtgttcaaattcatcatggaactgtttaaa
tataatgacaacagcagaaacaagttctctgacaattactacagagctgctctagtggag
gcagtgtctaaaacagtgactccagccatcactctcatgagtacgccagggcagggccct
actgctgacaatttgtcagcagagacaaagcagattctggaggaaattactcgttatctg
aacctggaaaagttactgccatgttacaggcacacagtcactgtcagctgtctgagtgcc
atcagaacactgcagaagtttggacatttgccaagtgaagtggagttcttcaaaagctat
gcccagcatggagtgttcagagacattcggctggcggccattgatgctatagtcgacttt
ataaaaactgaatccagaccagaggacatgtactggattctgaacttggtagaaacagat
ccagatctctatgtgagacactatgctctacaacagctggtcctgaatcctcccttcaga
agaatggaaacaagtgctctccacacggagggattagtggaacgcttgtggaaaatgatg
aactgcacattttcgtatgacagtaggctgcgttgtgatgcagcagatgtttatttcact
ctgtatggacgtacacgcccatcttgtctgcccatacctgataacatggttgttctgagt
ttaaaagacagaaagaataagatgaatcctgcttatgttcctgatgaaatggaggaaatg
tttgatgatgaggaagaggatgaggaggtgggaatggaggaaggtgagagttctcaggtg
gacactgaggccgacatcgacgttacggacattggcggggaggaaccttccctcaagaga
aagtctcctccccccacagagctgccgccacccttggtcctgtccatagggagtgtccct
gagacctgccccttgggaatcttcaatgaggacagtgcatcccagtccaagaggctgaaa
ctgaagatggaatcagaaacccttgaggaaccccaggtaactgagccctcaaaggcctct
gggactcaggaagtcaccgtgacaaaaacaccggtcacgccttcttctgcaacgtcggca
tacgctgctgaatttctcaaatttgttggggtaaaacaagagcatcctgctccagagccc
cagttatctgtaaccatggatacgtcctccagactcagtgaagggtcttcatcacccaca
accactgccgtggggtcagaatctagtgctcctctctcctttgctggactgttgccttct
tctacttcggcaacagacatgtcgtctgctacagactctaaagcacacaaagccaaaaag
aagaagaagaaaaacaagcacaaacataaacacaagcacaaacatgaccggcccgacaaa
gatccactggggcggattcgagaggggtccttcaacagctccgagaactcgcccagtgtt
actcagaccactcttagttcgccggaatttgaaatctaa
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